Nicotiana tomentosiformis: 104094491
Help
Entry
104094491 CDS
T05025
Name
(RefSeq) probable DNA helicase MCM8 isoform X3
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nto03032
]
104094491
03400 DNA repair and recombination proteins [BR:
nto03400
]
104094491
Enzymes [BR:
nto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104094491
DNA replication proteins [BR:
nto03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104094491
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104094491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA_3
Sigma54_activat
AAA_16
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
104094491
NCBI-ProteinID:
XP_009598733
LinkDB
All DBs
Position
7:115937135..115962841
Genome browser
AA seq
797 aa
AA seq
DB search
MSGEMMKNGKIQQRLTDFSGFSKILSLYFPNIDFSLDDSKFKVCLSSQLARFFSSPSGEH
FVSQVKEVDGTFSLPLDFLQFRKLSELQEFCVILESKPKDALLCMSASLHKQVFFEKLGD
ESFDDFVKINIRLHNYPESVIALKNLKAAYIDRLVSVRGTVVKVSTVKPLVMQMDFACTK
CGTSITRDFPDGKFSPPPICKLHGCKGRTFNPIRSTARLIDFQKIRIQELLKSENHEEGR
VPRTVECELTEDLVDACIPGDIVTVTGIIRVINNYMDIGGGKSKSKNQGLHYLYLEVVSI
TNSKSQSTLKGSQDNSNARSTELFDLFSFTSKDLEFIVKFSEEYGSDVFRQVLQSICPSI
YGHELVKAGITLALFGGVRKHSMDQNKVPVRGDIHIIIVGDPGLGKSQLLQAAASISPRG
IYICGNATTNAGLTVAVVKDPLTGDYAFEAGAMVLADRGLCCIDEFDKMSAEHQALLEAM
EQQCVSVAKAGLVASLPARTSVLAAANPVGGHYNRAKTVNENLKMSGALLSRFDLVFILL
DKPDEVLDKRLSEHIMSLHAKSVEQPPSTKRLCTALLDVREIDMNAKQGSLVAKLKLDPK
KDSDFVPLPGPLLRKYIAYARTYIFPRMTKPAAEILQKFYLKLRDHNTSADGTPITARQL
ESLVRLAQARARVDLREEITEQDALDVVEIMNESLYDKYVDEHGFVDFGRSGGMSQQKEA
KRFLSELHKQSESQQKDCFSISEIYSLADRIALNVPDIDTLVDNLNTVGHLLKKGPKTYQ
LSVSHTYCHGRLSSHAP
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagagatgatgaagaacgggaagattcaacagagattgacggattttagcggt
ttctctaaaatattgtctctctatttccctaacatcgatttctctctcgatgactccaag
ttcaaagtctgcctctcttctcagcttgctcgcttcttctcttctccttccggcgaacac
ttcgtttctcaggtgaaggaggttgatggcacgttctcattgccactggactttctccag
ttccgtaaactttctgaactacaggaattttgtgtaattttagagagtaaacctaaagat
gctctgttgtgtatgagtgcttcattacacaagcaggttttctttgagaaattgggagat
gaaagttttgatgattttgtgaagataaatatccgtctccacaactaccctgaatcagtg
attgcattgaagaacctaaaagccgcttatattgataggcttgtctctgtacgtggtaca
gtggtaaaagtcagcacagtcaagcctctggtgatgcaaatggattttgcctgtactaaa
tgcggaaccagtattactcgtgactttccagatggaaaattttcacctccaccaatatgt
aaattgcatggttgcaaaggcaggacttttaatcccataaggtctacagctcgacttatc
gactttcagaaaataagaattcaggagctgctgaaatctgaaaatcatgaagaggggcgg
gtacctcgaactgttgaatgtgaactaactgaagatcttgtggatgcatgcatccctgga
gatattgtcactgtcaccggcataattagggttattaacaactacatggatattggagga
ggaaagtcaaaaagcaagaatcaaggacttcattatttgtatctagaagtagtttctatt
acaaactcgaagtctcaatcaacactgaagggttcacaagataattctaatgctagatct
acagagctttttgatttattctcattcacttcaaaggatttggagtttattgttaagttt
tctgaagaatatggttctgatgtcttccgacaagtacttcaatctatttgtccctcgatc
tatggtcacgagctcgttaaagcgggaattacattagctttatttgggggtgtgaggaag
cattcaatggatcagaataaggttcccgtgagaggagatatccacataataattgtcggt
gatcctggattgggtaaaagtcaactacttcaagcggcagcttccatttctcctcgtggc
atatacatttgtggtaatgcaacaaccaatgctggccttactgttgctgttgtcaaggat
cctttgaccggtgactatgcgtttgaagcaggtgctatggttcttgcagatcgtggatta
tgttgcattgacgagtttgacaaaatgtctgcagaacatcaggccctattagaggctatg
gaacaacagtgcgtctctgttgcaaaggcgggacttgttgcaagtttgccagcacgaaca
tctgttttagcagcagcgaaccctgtcggtggccactacaaccgtgcaaaaactgtgaac
gagaacttgaagatgagtggtgctttgctttcacgatttgatttggttttcatactactt
gataaacctgatgaagtgctggacaagcgactctctgagcacattatgtcccttcatgca
aaaagtgtagagcagccaccaagcacgaaacggttatgtacagccttgctggatgttaga
gaaattgacatgaatgcaaagcagggttctttagtcgcaaaactgaaacttgaccctaag
aaagacagcgattttgttccattgcctggccctcttctgcgtaaatacattgcttatgca
agaacttatatatttcctaggatgacaaaaccagcagcagaaatcttgcagaaattttac
ttgaagttgagggatcataatacgtccgctgatggtacaccaataacagcaaggcaatta
gaaagcttagttaggttggcacaagctcgagctagagtggatctaagagaagagataact
gagcaagatgctctggatgttgtggaaataatgaatgaatcattgtatgataagtatgtt
gacgagcatggctttgtggattttggacggagtgggggaatgagtcaacagaaagaagca
aagcggtttttgagtgaattgcataagcagtcagaatcacagcaaaaggattgcttttca
atttcagaaatatatagtctggcagatcggattgcactaaacgttccagatattgataca
cttgtggataatctaaatactgttggtcatttactaaagaagggtcccaagacatatcag
ttatcagtatctcatacttactgtcatgggcggctttccagccatgccccatga
DBGET
integrated database retrieval system
