Nicotiana tomentosiformis: 104094566
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Entry
104094566 CDS
T05025
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104094566
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104094566
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104094566
NCBI-ProteinID:
XP_009598823
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Position
2:complement(84069993..84071998)
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AA seq
399 aa
AA seq
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MAKSTSFQLLSWLLICSVSTVVASKPSHEHETKAVDDYLPSYYPQPHKNLLNVIDSCWRL
NHDWSSNRKALADCAIGFGSNAIGGKYGDIYVVTDPSDDPANPEPGTLRYGVIQSEPLWI
IFKRDMVLTLKNELMVNSHKTIDGRGAKVEISNGPCITLDYVTNVIIHGISIHDCKPGKK
GMVRSSPEHVGERLGSDGDAISVFGSLNVWIDHCYLARATDGLLDVIHASTAVTISNNYF
TEHDKVMLLGHNDQYTADRSMKVTVVFNHFGRELVQRMPRVRYGYAHVANNYYDQWLMYA
IGGSADPTIFSEGNYFIAPDKAYNKEVTKRETEEKGWKSWKWRSSKDVFLNGAYFNPSGY
GSIAPKYTRGQSFIVAQGSLTPSLTSDAGPLQCVVNEPC
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcaacttccttccaactactttcatggcttctaatatgttcagtttctacc
gtagtagctagtaaaccaagtcatgaacatgaaactaaagctgtagatgattatcttcca
agttattatcctcagcctcacaaaaacctccttaatgtcatcgattcgtgctggagattg
aaccacgattggtcatccaatcgcaaggctttagcagattgtgcaataggctttggaagt
aatgctataggaggtaaatatggtgacatttacgtggtcactgacccttctgatgatcct
gcaaatcctgaaccaggcactcttaggtatggcgttattcagtccgagccactttggatc
attttcaaaagggatatggtacttacacttaagaatgagcttatggtcaatagtcacaag
actatagacggcagaggtgcaaaagttgagatttctaatggtccatgcattacattggac
tatgttacaaatgttattattcatgggattagtatccatgattgtaagcctggtaaaaaa
gggatggttcgtagtagtcctgaacatgttggtgaaagattaggctctgatggtgatgcc
ataagtgtgtttggttcgttgaatgtttggattgatcattgttatcttgcccgtgcaacg
gatggcctactcgatgttattcatgcttcaactgcagtaactatctccaacaattacttc
actgagcatgacaaagtcatgttgttggggcacaatgatcaatatactgcagacagaagc
atgaaagtcacagtagtattcaaccattttggccgtgaactagttcaaaggatgccaagg
gttagatatggttatgctcatgtggccaataattattatgatcaatggttaatgtatgcc
attggtgggagtgcagatccaacaatattcagtgagggaaattatttcattgctcctgac
aaagcttacaacaaagaggtcactaagagggagactgaagaaaaaggatggaagagttgg
aaatggaggtcttccaaggatgtgtttttgaatggagcatattttaatccatctggatat
ggaagtattgctccaaaatacacaagaggacaatcgtttattgttgctcaaggatcgtta
actccctctttaacttctgatgctggtcctcttcaatgtgttgtcaatgaaccttgctaa
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