Nicotiana tomentosiformis: 104094654
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Entry
104094654 CDS
T05025
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104094654
Spliceosome [BR:
nto03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104094654
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
104094654
NCBI-ProteinID:
XP_009598916
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All DBs
Position
2:37652446..37661912
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AA seq
815 aa
AA seq
DB search
MSATSFLVPNSNTLTLCPHSNFVIKPKTVLPFKSFNFKITTFSFKPNDNNHSSKNLEQCN
LEFENQDYGSTSNPISRSSSGIKGPTAPWMRGPLLVEPNQVLDLSKSRKKKDANFAKTQN
PNDALSGKVSGGRGKKAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPGSLTHWKDV
NFDFNEQTPYVKKDKVERVEFDILSRENEGRGNRRSGEKMPWESEERFVYRRMKKEKVLT
AAELKLDAMLLERLRGEAVKIQKWVKVKKAGVTRAVVDQIHLLWKNNELAMLKFDLPLCR
NMDRAQEIIEMKTGGFVVWRKKNALVVYRGCDYTLRQKDDPKRHHDFLRSQQNNSSTYTF
KKTSAFSSSNSSRSSVDVISGESSEEDSLTINESLYEREANRLLDDLGPRYVDWWWPKPL
PVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLA
AAIIKLWEKCHIAKIALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPS
QVASLVAEREVELRRCQLEEEAARFKAIETLPITTGESMSISNVGTLSEFQTIAEPGREK
SETEVQLVAEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKEILTQ
EERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTANL
LEAESGGILVSVDKLKEGHAIIIYRGKNYRRPELVPQNLLNKRLALSRSLEMQRLGSLKF
YANQTEQAISDLKCKLVEYTVKIGQMGEDLKGSGA
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctacttcatttctagttcccaattctaatacactgaccctctgtccccattcc
aattttgtcatcaaacccaaaacagttcttcctttcaaatcattcaattttaaaattacc
accttttccttcaaacccaatgataataatcattccagcaaaaacttggagcaatgcaat
cttgaatttgaaaatcaagattatgggtcaacatcaaaccctatttcacgttcaagttca
ggaattaaaggccctactgctccatggatgaggggtcctcttcttgttgaacccaatcaa
gttttggacttatccaaatcaagaaagaagaaagatgccaactttgctaaaacccaaaat
cctaatgatgcactttctggtaaagttagtggaggaagaggtaaaaaggcaatgaagaag
atttatcaaagcattgataagctccaagaaacgcaaaatttggaatttacacatgtggaa
actgatgctaagtttgaatttcagttcccacctggttctttaactcattggaaagatgtg
aactttgattttaatgaacaaactccatatgtgaaaaaggacaaagtggaaagagtggaa
tttgatattttatcaagagagaatgaaggaagagggaatagacgaagtggagagaaaatg
ccatgggagagtgaggaaagatttgtgtataggagaatgaagaaggagaaagttttaaca
gctgctgagttgaaacttgatgcaatgttgcttgagagattgaggggtgaggctgtaaag
attcagaagtgggtgaaggttaagaaagcaggagtgacacgagctgttgttgaccaaatc
cacttgctttggaagaataatgaacttgcaatgctcaaatttgacctgcctttatgtcgt
aatatggacagagctcaagaaattattgagatgaagactggaggctttgtagtttggagg
aagaaaaatgctctggttgtttatagaggatgtgattatactttgagacagaaggatgac
cccaaacggcatcatgattttctccgtagtcaacaaaacaattcatctacttacaccttt
aaaaagacaagtgctttctcgtcgtcgaactcaagtaggagcagtgtagatgtgataagt
ggtgaaagctcagaagaggatagcctaacaataaatgagtcactctatgagagggaagct
aatagattattggatgacttaggacctcgttatgttgattggtggtggccaaagccttta
cctgtggatgcagatttgcttcctgaagtggttcctggatttaagccaccatttagactt
tgcccaccacgttcaagatcaaagctgactgatgatgaacttacacacttaaggaagctt
gctcgttctttgccaactcattttgtcctcgggagaaacagaaaactgcaaggcttggct
gcagccatcataaaattgtgggagaaatgtcatattgcaaagatagctttgaagtgggga
attccaaatactaacaatgagctaatggcaaatgagctgaagtatcttactggaggagtt
cttttattgcggaataagttctttataatcctatacagaggtaaggattttcttccttct
caagttgcaagccttgtagctgagagggaagtggaactcagaagatgtcagcttgaggaa
gaagctgcacgattcaaagcaattgaaacccttccaatcactactggagaatcaatgagc
attagtaatgttgggactttatcagaattccagacaattgcagaacctggaagggagaaa
tctgagactgaagttcaattagtagcagaaaaagaaagattagaaaaagaactgagagat
gaacagcacagcctttacattctcaagaagaagattgaaaaatcatctatagcattggga
aagttagatgctgcatggagacctgccaaaccagatgtcgataaagaaattttaacacaa
gaagagagacgatctcttaggcagataggattgaagatggacaggagtttagtgcttggg
agacgcggtgtttttgatggtgtattagcaggtctccatcagcattggaagcacagagaa
gttgttaaggtgatcacaatgcagaaaatcttttctcaggtcattcatactgcaaatctc
ctggaggcagaaagtggtggaattctggtttctgtagacaaacttaaagaaggccatgct
ataataatttatcggggaaagaactacaggcgcccggaattggtgccgcaaaatctttta
aacaaaagactagctttaagtcggtcccttgaaatgcagagacttggatcattgaagttt
tatgcaaatcaaacggagcaggcaatctctgatcttaagtgcaagttggtagaatataca
gtaaagattggtcaaatgggggaagatctaaaaggtagtggtgcataa
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