Nicotiana tomentosiformis: 104094786
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Entry
104094786 CDS
T05025
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104094786
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104094786
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104094786
NCBI-ProteinID:
XP_009599078
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Position
7:complement(114422236..114427685)
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AA seq
363 aa
AA seq
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MGNHHTRYKHHHHHQQETSFPVPPIPTAQSQKTVSTQMGLVLPYGQVDSSLCGLAGQAEG
FGASSIGGRDGHIYQVMNLNDDGPGSLRDGCRKKEPLWIVFEVSGTIELRSYLSVSSYKT
IDGRGQRIKITGKGLRLKECEHVIICNIEFEGGRGPDVDAIQIKPKSRHIWIDRCSLSDY
DDGLIDITRESTDITVSRCHFSKHDKTMLIGADPSNCTDRCMRVTIHHCFFDGTRQRHPR
VRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFKYLTEKAADKEEGCT
GSIKSEDDLFVSGTQAGLLSTCSKSNIFNPSDFYRHWTVEHPSDALKHYLQHCTGWQSIP
RPN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccaccatacccgttacaaacaccaccatcaccatcaacaagaaacctcattt
cctgttcctccaatacccacagctcaatcccagaaaacagtgagtacccaaatgggtttg
gttttgccttatggtcaagttgactctagcttgtgtggtctagctggtcaagctgaaggc
tttggtgcttcttccattggtggtcgtgatggtcatatttatcaagttatgaatctcaat
gatgacgggccaggatcacttcgtgatggatgtcgtaaaaaagaacctctatggatcgtc
tttgaagtttcagggaccattgagctccgatcttatttgagtgtgtcgtcttacaaaact
attgatgggcgaggccaaagaatcaaaatcacagggaaaggtttgaggttgaaagagtgt
gaacatgtgatcatctgcaatatagagtttgagggaggcagaggacccgatgttgacgcc
attcagattaaaccaaagtcaaggcatatttggatagaccgttgtagccttagcgactat
gacgatggtttaattgacatcacaagggagagcacagatattactgtttctaggtgtcac
ttttcaaagcatgataagaccatgcttattggagcagatccttctaattgtaccgacaga
tgtatgcgggtcaccattcaccactgcttttttgatggaactagacagcggcatcctcgt
gttagatttggcaaagtacatttgtacaacaactacaccaggaactggggaatttatgct
gtttgcgcaagtgtagaatcacagatatattcccaatgcaacatatatgaagctggacaa
aaaaaggtggcatttaaatatctcacagagaaggcagctgacaaagaggaaggatgcact
ggtagcattaaatctgaagatgacttgtttgtctctggaactcaggctggtttgttgtct
acttgcagcaaaagtaacatcttcaatccatccgacttctaccgacactggactgtagaa
catccgagtgatgctctcaaacactaccttcaacactgtacaggatggcagagtatcccg
cggccaaattga
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