Nicotiana tomentosiformis: 104094893
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Entry
104094893 CDS
T05025
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03018
RNA degradation
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104094893
09123 Folding, sorting and degradation
03018 RNA degradation
104094893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104094893
03041 Spliceosome [BR:
nto03041
]
104094893
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104094893
mRNA degradation factors
5'-3' decay
Lsm complex
104094893
Spliceosome [BR:
nto03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104094893
Complex C
U2 snRNP components
104094893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
LSM14
Motif
Other DBs
NCBI-GeneID:
104094893
NCBI-ProteinID:
XP_009599205
LinkDB
All DBs
Position
1:100643673..100648829
Genome browser
AA seq
93 aa
AA seq
DB search
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDEDKYPHMKSVRNC
FIRGSVVRYVQLPQDGVDIELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttttctcatatttcaaggatctggtaggcagagaagtgactgtggaactgaag
aatgacttggctatccgaggaacactacattcagttgatcagtatctgaacattaagctt
gaaaacacgagggttgttgacgaggacaagtacccccacatgaaatcagtcaggaattgc
ttcatcagaggatcagtggtgagatatgtgcagttacctcaggatggagttgacatagaa
ctacttcatgatgctacaaggagagaagctcggggtggctga
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