KEGG   Nicotiana tomentosiformis: 104094934
Entry
104094934         CDS       T05025                                 
Name
(RefSeq) coatomer subunit alpha-1-like
  KO
K05236  coatomer subunit alpha
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nto04131]
    104094934
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nto04147]
    104094934
Membrane trafficking [BR:nto04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    104094934
Exosome [BR:nto04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104094934
  Exosomal proteins of bladder cancer cells
   104094934
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st TPR_COPA_B EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_Aladin WD40_RFWD3 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_At4g14310 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 104094934
NCBI-ProteinID: XP_009599251
LinkDB
Position
4:complement(128466346..128471894)
AA seq 1218 aa
MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCALFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVQFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSSDSLFYVKDRFLRVYEYSTQKENQLIPIRRPG
SNSLNQGPRTLSYSPTENAVLICSDVDGGSYELYIIPKDSYGRGDTAQDAKRGTGGSAVF
VARNRFAVLEKSTNQVLVKNLKNETVKKSLLPTVTDAIFYAGTGNLLCRAEDRVVIFDLQ
QRIVLGELQTPFIRYVVWSSDMESVALLSKHSIVIADKKLVHRCTLHETIRVKSGAWDDN
GVFIYTTLTHIKYCLPNGDSGIIKTLDVPVYITKIYGNTIFCLDRDGKNRPIIIDSTEYI
FKLALLKKRYDQVMSMIRNSELCGQAMIAYLQQKGFPEVALHFVKDELTRFNLALESGNI
EIALESAKKLDQKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNLDKLSK
MMKIADVKNEVMGQFHDALYLGDVRERVKILENAGHLPLAYITATTHGLKDIAERLAEEL
GDNVPSLPKEKKASLLLPPTPILGGGDWPLLMVTKGIFEGGLDATVRGGHEEYEDVADAN
WGESLDIGEVENLQNGDISMVLEDEDGQEENDGEVGWDLEDLDLPPDTDTPKTASNARSS
VFVTPTPGMPVSQIWVQKSSLAAEHAAAGNFDTAMRLLSRQLGIKNFSPLKQLFADLHMG
SHTHLRAFSSAPVISFAIERGWSESASPNVRGPPALVFNFGQLEEKLKAGYRATTAGKFS
DALRLFLSILHIIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRKELKDNPVRQQEL
AAYFTHCNLQLPHLRLALQNAMSVCFKAGNLSPAANFARRLLETNPTNESQAKIARQVLQ
QAEKNMRDATQLNYDFRNPFVVCGATYVPIYRGQKDVTCPYCATHFVPAQQGQLCTVCDL
AVVGADASGLLCSPSQVR
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgttgacgaagttcgaaacgaagagtaatcgagtcaaaggactcagttttcataccaaa
aggccatggatcttagctagtcttcatagcggtgtgatccagctttgggattaccgtatg
ggaacactcattgatcgatttgatgagcacgatggccctgttcgcggcgttcattttcac
aaatctcagcctctctttgtatccggaggagatgactacaagataaaagtctggaattat
aagctgcatcggtgcttatttacccttcttggacatcttgattatatccgcaccgttcaa
ttccatcatgaatatccctggattgtcagtgcaagtgatgatcagacaatcagaatatgg
aactggcagtctcgcacttgtatttctgtcttgactgggcacaaccattatgtgatgtgt
gccttatttcatcccaaagaggacttggttgtttctgcatcattggatcagaccgttcgg
gtctgggatattggtgccctaaggaagaaaactgtttctcctgctgatgacatcttgcgc
ttgagccagatgaacacagacttctttggtggagtagatgctgttgtgaaatatgtcttg
gagggtcacgatcgaggggttaactgggcttcatttcatcctacgctgcccctgatcgtc
tctggtgcagatgatcgccaggtgaaaatctggcggatgaatgatacaaaggcttgggag
gtggatacattgagaggccatatgaacaatgtatcatgtgttcagttccatgcgaagcaa
gatattattgtttcaaattcagaggataagagcattcgcgtgtgggatgctacaaaaagg
actggtcttcagactttccgcagggagcatgacagattctggatccttgcagctcatcct
gagatgaatcttctagcagctggtcatgacagtgggatgatagtgttcaagttggagaga
gaacgccctgctttttctgtgagcagtgattccttgttttatgtgaaggatcgttttctc
cgtgtgtacgagtactcaactcagaaggagaatcagttgataccaattagaagacctggt
tcaaacagtctgaaccaaggtccacgaacgctctcttacagtcctacggaaaatgctgtt
ttgatctgttcagatgtggatgggggttcctacgaactgtacatcatacctaaagacagt
tatggtaggggtgatactgctcaagatgcaaaaaggggaactggaggatcagcagtgttt
gttgctcgtaacaggtttgcagtgcttgagaagagcaccaaccaagtcctggtcaaaaat
ctgaaaaatgagactgttaagaaaagccttcttcctactgttactgatgctatattttat
gccggcacaggaaacttactatgcagggcagaggacagagttgttattttcgatctccag
cagagaattgttcttggagagcttcagactcctttcatcagatatgttgtttggtcatcg
gacatggaaagtgtcgctttgcttagcaagcattccatagtaatagccgataagaagctt
gtgcaccgttgcactcttcacgagacaattcgtgtcaagagtggtgcctgggatgacaac
ggggtcttcatatatacaactctcacccacatcaagtattgtcttcccaatggagacagt
ggaatcatcaaaaccttagacgtcccagtctacattactaagatatatgggaacactatc
ttttgcttggatcgagatgggaaaaaccgtcctatcattattgattcaactgaatacata
ttcaagctagccctgcttaaaaagagatatgaccaggttatgagtatgataagaaactcc
gagctttgtggtcaagccatgattgcctatttgcagcagaagggttttcctgaggttgcc
cttcattttgttaaggatgagcttactcgtttcaacttagcacttgaaagtgggaacatt
gagatagctcttgaatctgctaagaagcttgatcagaaagatcattggtataggcttggg
gtggaggcccttcggcagggtaatgcaggtattgttgaatacgcctatcagaagacgaag
aactttgagaggctctctttcctttatctaataacaggaaacctggataagttatcgaaa
atgatgaaaattgctgacgtaaaaaatgaagttatgggtcaattccacgatgccttgtac
cttggtgatgttcgtgagcgtgttaagattttggaaaatgctggtcatttgccccttgca
tatatcacagctacgacccatgggctcaaggatattgctgagcgtcttgcagaagaactg
ggtgataatgttccatcattaccaaaggagaaaaaagcatctctgctgctgcccccaact
cctatcttgggtgggggagactggcctctattgatggtgacaaaagggatatttgaaggc
ggtctggatgctacagtcaggggtggacatgaggagtatgaagatgttgcagatgctaat
tggggtgagtcactggatataggtgaggtggaaaatctgcagaatggagatatcagtatg
gtgctcgaggacgaggatggacaagaagaaaatgatggggaagtaggatgggatcttgag
gatctggatctgccacctgatactgacacaccaaaaactgcttcaaacgctcgctcttct
gtttttgttaccccaacccctggcatgcctgtgagccagatttgggtccaaaaatcatct
cttgctgctgaacatgcagctgctggcaatttcgacactgctatgcggttgctgagccgg
caactagggattaagaatttctctcctttaaagcaattgtttgctgatctacatatggga
agccacacacatctacgtgccttctcctcggcaccagttatctcttttgcaattgagaga
ggttggagtgagtcagctagtcccaatgtgcggggtccacctgcacttgtcttcaatttt
ggtcagctggaagaaaaacttaaagctggttatagggccacaactgctgggaaattttct
gatgcgcttagattattcctgagcattcttcacattattcctctgattgtggttgagtca
aggcgagaggtggatgaggtcaaggaattgattatcatagtgaaggagtacgttttgggc
ttgcagatggagcttaagaggaaggaattaaaagataatcctgttcgtcagcaggagttg
gctgcctacttcacacactgtaatctgcagcttccgcacttgagactcgcattacagaat
gctatgtctgtctgctttaaggcaggcaatcttagcccagcggctaactttgctagaaga
ctcttggagacaaatccaaccaatgaaagccaagccaaaatagcccgccaggttctgcaa
caagctgagaaaaatatgcgagatgctacacagttgaattatgacttcagaaatcctttt
gtggtatgtggcgcaacatatgtccccatatacagaggccagaaggatgtcacttgccct
tattgtgctactcattttgttccagcccagcaaggacagctttgtactgtttgcgatctt
gcagttgtaggagcagatgcatctggtttactttgctcaccttcgcaggtcagataa

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