Nicotiana tomentosiformis: 104095287
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Entry
104095287 CDS
T05025
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104095287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104095287
04121 Ubiquitin system [BR:
nto04121
]
104095287
03036 Chromosome and associated proteins [BR:
nto03036
]
104095287
03400 DNA repair and recombination proteins [BR:
nto03400
]
104095287
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104095287
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104095287
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104095287
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104095287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-RING_UBOX
zf-HC5HC2H_2
zf-C3HC4_2
zf-C3HC4
PTCB-BRCT
zf-RING_6
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-C3HC4_3
Prok-RING_4
zf-RING_10
RTT107_BRCT_5
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
104095287
NCBI-ProteinID:
XP_009599672
LinkDB
All DBs
Position
2:186682438..186691668
Genome browser
AA seq
687 aa
AA seq
DB search
MAAETQSISRLLNPLAFHIQKLGLELKCPLCLNLLNKPMLLPCDHIFCNLCVPRSTQVQC
ECPVCKHQYVNQEIRAVPHVESMIAIFRSLDATFNAKVFQFKSPDAGWSSEQYPISVNLD
DKSRNEQTVKAIVSSNDPNKEINRCNGHGIPWNGVSHLSLLPSSDRKADLKNERNIAEEI
DLNQLQQQSPGSSHSSDNNKDIVKETSELRVRNNDIKSHTAKMSVEDSSHVVEGLVHHTI
KHEHVFEERDLKRQKKLSYELSETVLQSHAITNSDRSLACKLSESSLVAQPKAVSDQHLP
KGSVCAFCHTSKITEGTGPMLHYANGREVVGDVTSLSKAIPVHMKCIDWAPQVYYDGDTL
RNLEAELARAAKLKCSGCGLKGAALGCLMKSCRRSYHMPCAFEIQDCRWDCDNFVMLCPS
HKSVKFPSEKSKSRKRASMEACPESAPITSERLNFWATSSDGPKEWVLCGSALSSEEKYM
MVKFANMCGATVCKTWNPNVTHVIAATDEKGACTRTLKVLMAILGGKWILTIDWIKACIG
ANCPVIEEPYEVSLDNHGCFGGPKAGRLKASSNAPKLFDGFKFYLSGDYVAAYKKDLLDL
VEKGGGSIIHSKEQLIYQIGSMKATNSSCLVVYNLDPPRGCMSGEDSNVLLHRQAEAEDL
AKQIGCQVIQHTWILQSIAACKLEPFC
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggagactcaaagcatttctcggttactaaacccattggcatttcatattcag
aaattgggtcttgaactcaaatgccctctttgcttaaacttgctgaataaacctatgttg
cttccatgcgatcatattttctgcaacctctgtgttccaaggtctacccaagttcaatgt
gaatgccctgtatgcaaacatcaatatgttaatcaagaaataagggcagtgcctcatgtg
gagagtatgatagccatatttagaagcttagatgctactttcaatgctaaagtctttcaa
ttcaaatctcctgatgctggatggtcatcggaacaatatcctatttctgttaatcttgat
gataaatcaagaaatgaacaaactgtcaaagccatagtaagcagcaatgatccaaacaag
gaaattaataggtgcaatggacatggaattccttggaatggtgtgagtcatttgagtctt
ttgccttcttctgacagaaaggcagacttgaaaaatgaaaggaatattgcagaggaaata
gatttgaatcaattgcaacaacaatcaccaggcagctctcattcatctgataacaacaaa
gatatagttaaagagacaagtgaactgagagtaagaaataatgatataaaaagccatact
gcgaagatgtccgtagaagatagctcacacgtggttgaaggtctagtgcaccacacaatt
aagcatgaacatgtgtttgaggaaagagacttgaagagacaaaagaaattaagctatgaa
ttgtcagagacggtcttgcaaagtcatgctattaccaactctgaccgctctttggcatgt
aaattgagtgaatcttctttggttgctcagccaaaagcagtttcagatcaacatcttccg
aaaggaagtgtttgtgctttctgccacacatctaagataacagagggaactggaccaatg
ctgcactatgcaaatggaagggaggtggtgggagatgttacttcactttcaaaagccata
cctgtgcacatgaaatgtattgactgggcacctcaagtatattatgatggagataccttg
agaaatttggaggctgaattggcaagagctgcaaaactcaagtgtagtggctgtggccta
aagggtgcagcacttggctgcctcatgaagtcatgccgcaggagttatcatatgccttgt
gcatttgaaatccaagactgccgatgggattgtgacaactttgtaatgctctgcccgagt
cataaatctgtcaaatttcctagtgagaagtcaaagtctaggaagcgtgccagtatggaa
gcatgtccagaatctgctcccataacatctgagcgattgaatttttgggcaacatcatca
gatggacccaaagaatgggttctatgtggatctgctctatcctcagaagagaagtatatg
atggtcaagtttgctaacatgtgcggcgcaactgtgtgcaagacttggaacccaaatgtc
acccatgtcattgcagcaacagatgaaaagggtgcatgcaccagaacactgaaagttctc
atggcaattttgggtggaaaatggatcctaacaattgattggataaaagcctgcatcgga
gcaaattgtcctgtgattgaagaaccttatgaagttagcctggacaatcatggctgtttt
ggtggccctaaagctggtaggcttaaggcttcatccaatgcacctaaactttttgatggt
ttcaagttttatctgagtggagattatgtagcagcttacaaaaaggacctattagatcta
gtcgaaaagggtggaggttccatcattcacagtaaggaacagctgatttaccagataggt
tctatgaaagcaactaactcatcttgtctagttgtttataatcttgatcctccacgcggt
tgcatgtctggcgaagatagcaatgttttgctgcacagacaagctgaggctgaagatttg
gccaagcaaattggttgtcaggtcattcagcatacatggatcctgcagtctattgctgca
tgtaaattagaacctttctgctga
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