Nicotiana tomentosiformis: 104095301
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Entry
104095301 CDS
T05025
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nto03400
]
104095301
Enzymes [BR:
nto01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
104095301
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104095301
Prokaryotic type
104095301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
104095301
NCBI-ProteinID:
XP_009599696
LinkDB
All DBs
Position
8:complement(124670689..124675813)
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AA seq
488 aa
AA seq
DB search
MASPIPVVQSGRIRVLKQGSGPLVGPVVYWMFRDQRIRDNWALIHAVDEANKANVPVAIA
FNLFDQFLGAKARQLGFMLRGLQKLHSNLESTLQIPFFLFQGEAVDTIPNFLKECGASLL
VTDFSPLRDVRSWKEKVCESVSESVTVHEVDAHNVVPVWVASNKLEYSAKTIRGKINKLL
LEYLIELPAIGPPKIKWSSSNPPIDWPKLIADVVRKGAEVPELEWCEPGEDAALEVLMGS
KNGFLTVRLKNYSTDRNNPLKPQALSGLSPYLHFGQMSAQRCALEASKVRKLYTQAVDTF
LEELIVRRELADNFCYYQPRYDSLLGAWEWARKTLMEHASDKREHIYTREQLEKAQTADP
LWNASQLEMVHYGKMHGFMRMYWAKKILEWTSGPEEALAITIYLNDKYHIDGRDPSGYVG
CMWSICGLHDQGWRERPVFGKIRYMNYAGCKRKFNVDGYISYVKRLVGESKKRKAEVYFD
NKAKELRS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcatctccgatccctgtcgttcagtcgggtcggatccgggttctgaagcaaggatca
ggaccgttggttggaccggtagtgtactggatgttcagagatcaacggataagagataac
tgggcattaatccacgccgttgatgaggctaacaaagcaaatgtaccagtagctattgct
ttcaatttgttcgatcagttcttaggtgcaaaagctagacaattagggtttatgcttaga
ggccttcaaaaacttcatagcaacctcgaaagtactcttcaaattcccttttttctattt
cagggagaagctgtagacacaattcccaattttctgaaagaatgtggagcttctcttcta
gtaacggatttctcacctttgagggatgtgaggagctggaaagaaaaagtttgtgagagt
gtgagtgaatcggtaacagtacacgaggttgatgcgcacaatgttgttcctgtttgggtg
gcatcaaataaattagaatacagtgctaaaaccatacggggtaaaataaataagctgctt
cttgagtatctaatcgaattacctgcaatagggcctcccaagataaagtggtcgtcttca
aaccctccaatagattggccaaaactaattgccgatgtcgtaaggaaaggagcagaagtt
cctgaacttgaatggtgtgaaccaggtgaagatgctgcattggaagtgcttatgggaagt
aaaaatgggttcctgacagttaggttgaagaattattcaacagaccggaacaaccctctg
aaaccccaagcactttctggtctctctccttatttgcactttgggcagatgtcagcacag
cgatgtgctttagaagcaagcaaagttcggaaactttatacccaggcagttgacacattt
ctggaggaattgattgtgcgcagagagcttgctgataatttctgctactaccagcctcga
tatgattcattactgggtgcatgggaatgggcacgcaaaaccttgatggaacatgcatct
gataagcgtgaacatatatacacgcgagagcaattggagaaggcacaaactgcagaccct
ctttggaatgcttctcagttagagatggttcattatgggaaaatgcatggttttatgagg
atgtattgggctaaaaagatacttgaatggacaagtggaccggaagaagctctggctatc
acaatatatttgaatgacaagtatcatatagatggaagggatcctagtggttatgttgga
tgcatgtggtcaatatgtggcctacacgaccagggttggagagagcgtcccgtatttggg
aaaatacggtacatgaactatgcaggttgcaagaggaaattcaatgtggatggatatatt
tcatacgttaaaagactagtaggtgaaagcaagaaaagaaaagcagaagtatatttcgac
aacaaggcaaaggaactgcgtagttag
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