Nicotiana tomentosiformis: 104095447
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Entry
104095447 CDS
T05025
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
nto03012
]
104095447
Enzymes [BR:
nto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104095447
Translation factors [BR:
nto03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104095447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
UBA_DHX29
DEAD
Helicase_C
HA2_C
DSRM_DHX29
HA2_N
nSTAND3
DND1_DSRM
AAA_19
ATPase
AAA_22
dsrm
Cas3-like_C_2
ABC_tran
NPHP3_N
Rad17
Motif
Other DBs
NCBI-GeneID:
104095447
NCBI-ProteinID:
XP_009599885
LinkDB
All DBs
Position
1:18669727..18711377
Genome browser
AA seq
1460 aa
AA seq
DB search
MAPKKKKPQSSSSKGKASSSSTGPKLQISAENENRLRRLLLYSGRSTQSPAPTPAEDALS
KAQKAKKLRSIYEKLSCEGFSDDQIERALSALKVLIKKMSPLTNNFLYMITKERATFEAA
LDWLCLNLRGNELPLKFSSGTSQLNEGSVGIISTAREDWVPSADSSVAEVKDERKPEVSV
VPKGRSDSESLRTVERAQADWIRQYMEQQEEDEAESWESGLFDDGSLEQVSRKRRSVESI
VQEFHNARLEAIHAKERGDKKSHEQVSRTIRRIKQEISALGLPDDILESAHESASDYAVL
DTSSEKLDVDNVPSHNFRTSHEQEIGIDEKVAVNSSSNEFTENSPSSGPIDDKVAPGGEA
EDVELGDFLFEEVSSADVSSTILELQKKEKMRELCSQKNLEKLEGIWKKGDPQKIPKAFL
HQLCQRSGWEAPKYAKISGKGNNSHYTVSIMRKASGRGKSRKAGGLVTIELPSRDHTSST
TEDAQNRVAAYALHRLFPDLPVHMPITEPYASLILQWEEGDSVIDIVDDQVERRAYFVDS
LLDASGSGNITHCDVSNNASEEKFLEPHATEDKTAIADFADSNPSKEAESFSLKKEQEGR
KKLKKYQEMLKSRAALPIADLKGKILHSLEENDVLVICGETGCGKTTQVPQFILDDMIES
GRGGHCNIICTQPRRIAAISVAERVADERCESSPGSSDSLVGYQVRLDSARNERTKLLFC
TTGILLRMFSGNKNLAGVSHIIVDEVHERSLLGDFLLIVLKSLIQKQSALCTAKLKVILM
SATVDSHLFSHYFGHCPVITAQGRTHPVSTYFLEDIYESTNYRLASDSPASLSYGISTRE
KNAPIGNHRGKKNLVLSGWGDESLLSEEYINPYYDPSNYQNYSEQTQKNLRKLNEEIIDY
DLLEDLVCYIDETYPEGSILVFLPGVGEIHTLYDRLSVSFQFSGQSSEWILPLHSSVASE
DQKKVFMRPPENIRKVIIATNIAETSITIDDVVYVVDCGKHKENRYNPKKKLSSMVEDWI
SQANARQRRGRAGRVKPGICFCLYTSYRYEKLMRPYQIPEMLRMPLVELCLQIKLLSLGS
IKLFLSMALEPPKDEAIASAISLLYEVGAVEGDEELTPLGYHLARLPVDVLVGKMLLYGG
VFGCLSPILSISAFLSYKSPFVYPKDERQNVERAKLALLSDKLGGETDSGSGNWQSDHLL
MMVAYKKWEKILRENGVKAAKQFCSSYFLSSSVMYMIRDMRIQFGTLLADIGFINIPKKS
EIDWKKKEKLDSWLSDISQPFNTNSNHSSILKAILCAGLYPNVSAREEGIATTALGNLKQ
SAGLSAKSNPAWYDGRREVHIHPSSINSNLKDFQYPFIVFLEKVETNKVFLRDTTVISPY
TILLFGGPINIQHQTGRVTIDGWLEVAAPAQTAVLFKELRLTLHDILKELIRNPQVSLVT
DNEVLRSIVQLLLEEDKQRK
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgaagaagaagaagcctcaatcatcctcatccaaaggcaaagcttcttcttct
tccactggtcccaaattgcaaatatctgccgagaacgagaaccggctccgacggctgttg
ctttattccggccgatctacacaatctccggctccaactccggcagaggatgctctctct
aaagcacagaaggccaagaaacttcgttctatttacgaaaagctttcttgcgagggcttt
tccgacgatcaaatcgaacgcgctttatccgctctcaaggtactaatcaagaaaatgtct
ccacttacaaataattttttgtatatgattacgaaggagagagctacgtttgaagctgct
ttagattggctatgcttgaatttgcgagggaatgagcttcctctgaagttttccagtggt
acttctcaattgaatgaaggttctgttggtatcatatcaactgcccgagaagattgggtt
ccttcagcagattcatctgtggcagaagttaaagatgagagaaaacctgaagtttcagtt
gtgccaaagggtcgaagtgatagtgaatctctacgaacagtcgaacgtgcacaagcagat
tggatccgtcagtatatggaacaacaggaagaggatgaagctgaaagttgggaatctggt
ttgtttgacgatggttctctagagcaggtctcgcgaaaaaggcgtagtgttgagtctatt
gtccaagaatttcataatgcgaggctggaagctattcatgcaaaagagcgtggtgacaaa
aagagccatgaacaagttagcagaaccattcggaggatcaagcaggagatatctgctcta
ggactaccggatgatatcctggaatctgcacatgaaagtgcttccgactatgcagtgttg
gacacatcttcagagaagcttgatgttgataatgttccttcacacaatttcagaacgtct
catgaacaggagatcggaattgatgaaaaggtggctgtcaatagcagctccaatgagttc
actgaaaacagtccatcaagtggtcctatagatgataaggtggctccaggaggagaagca
gaagacgtagagcttggtgatttcttatttgaagaagtttcctctgctgatgtgtcatct
acgatactagaactgcagaagaaagaaaagatgagagaattatgtagtcagaaaaactta
gagaagttagaaggtatatggaaaaagggagatccacaaaagattccaaaggcttttctt
caccaactttgtcaaagatcagggtgggaggcaccaaaatatgcgaaaatatctggaaaa
ggaaataattcacattacactgttagtataatgcgcaaagccagtgggaggggtaagagc
agaaaagctggaggtctagtaacaatcgagcttcctagtcgggatcatacttcttctact
actgaggatgcacaaaacagagttgcagcctatgctctccatcgcttgtttccagatctc
ccagttcacatgccaattaccgagccatatgcatcacttattttgcagtgggaggaaggt
gattccgtgatagatatagtggatgatcaagtggaacgaagggcctatttcgtggattca
ttactagatgccagcggttctggaaacataactcattgtgatgtctccaataatgctagc
gaagaaaagtttttagagcctcacgccactgaagataaaacagcgattgctgattttgca
gacagtaatccaagtaaagaagcagaaagtttctctctgaaaaaggagcaagagggtaga
aagaagttaaagaagtaccaggaaatgttgaaatcacgggctgcccttcctattgctgac
ttaaaaggcaagattctgcattcactggaggagaatgatgttttggtcatttgtggggaa
acaggttgtgggaaaacaactcaggtccctcaatttatactggatgacatgattgaatca
ggacgtgggggacattgtaacattatatgcacacaaccaaggagaatcgcggctatttca
gtggctgaaagagttgctgatgagcgttgtgaatcttcaccaggttcgagtgactccttg
gttggttaccaagttcgcctcgatagtgcaaggaatgagagaacaaagctcctcttttgt
acaactggcattcttttgagaatgttttcaggaaataaaaacttggctggtgttagtcat
atcattgttgatgaagtgcatgagaggtctcttctgggtgattttctgctcattgtcttg
aagagtctcatccagaagcaatctgccctttgtacggcaaaactgaaagttatactcatg
tctgcaacagtagattcacatttgttttctcattacttcggtcactgccctgtaattact
gctcaaggacgaacacatcctgtttcaacttattttctcgaggatatttatgagagtacc
aactaccgccttgcatccgattctcccgcttctttgagctatgggatatctactagggaa
aagaatgctcctattggcaatcacagggggaagaagaaccttgtcctatctggatggggt
gatgaatcgttgctctctgaagaatacataaatccctattatgatcccagtaattatcaa
aactacagcgaacaaactcaaaagaatttgaggaaattgaatgaagaaattattgattat
gatcttctcgaagacctggtatgctacattgatgaaacataccctgagggttctatactg
gttttcttaccgggggttggggaaatacataccttatatgatagactgtctgtctccttc
cagtttagtggacaatcttctgaatggattcttcctttgcattcttctgtagcatccgag
gatcagaaaaaagtgtttatgagacctccagaaaacatccgtaaggttataatagctaca
aatattgcagagactagcataaccatagatgatgtagtttatgtggtagactgtggaaag
cacaaagaaaatcgctataatccaaagaagaaattgtcaagcatggttgaagattggata
tctcaagcaaatgcaaggcaacgtcgaggcagagctggacgtgtaaagccaggaatctgc
ttttgtctctatacttcttaccgatatgagaagctcatgcgaccttaccagatcccggag
atgctgcgaatgcctttggtagaattgtgcttacaaatcaaactgctatcacttggaagc
ataaagctatttttgtctatggcccttgaacctccaaaggatgaggctattgcgtcagca
atttctttattgtatgaggttggtgccgttgaaggggatgaagagttaactcctctcggg
tatcatttggcgagacttcctgttgatgtgttggttggaaagatgctgttatatggtgga
gtatttggctgcttgtcgccaattctatctatttcagccttcctcagctacaagtctcca
tttgtttatccaaaagatgagaggcaaaatgttgaaagagcaaagttggcacttttgagt
gataagcttggtggtgaaactgactctggcagtggtaactggcaatctgaccatctccta
atgatggtagcgtataaaaagtgggagaaaattttgcgggagaatggagtcaaagcagca
aagcagttttgcagctcatatttcttaagcagttctgtcatgtatatgataagagacatg
agaatacaatttggaacattgttagctgacattggattcatcaacatcccaaaaaagtcg
gagattgattggaaaaagaaagagaagcttgacagttggctttcagatatatcacaacct
tttaatacaaattcaaatcattcctcaattcttaaggccatattgtgtgcaggtctttat
cccaatgtatctgccagagaagaaggcattgctacaactgctcttgggaacctaaaacaa
agtgcaggtctttcagcaaagagtaaccctgcatggtatgatggaagacgcgaagttcac
attcacccttcgtcaatcaactctaacttaaaagattttcagtacccatttatcgtcttt
cttgaaaaggtagagactaacaaggtatttttgcgagacaccaccgttatctctccttat
actatacttctttttggtggcccaataaacattcagcaccagactggaagagttaccata
gatggatggttagaagttgcagcaccagcacaaacagctgttctatttaaggaactccgg
ctaactcttcatgatattctcaaggagcttattcgtaatcctcaggtttccctggtgact
gataatgaagttctcagatctatagtccagttgctattggaagaagataaacaaagaaaa
taa
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