Nicotiana tomentosiformis: 104095453
Help
Entry
104095453 CDS
T05025
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104095453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104095453
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104095453
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
U-box type E3
104095453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
HEAT_2
Neurochondrin
zf-RING_UBOX
Arm_2
zf-C3HC4_4
MLKL_N
KAP
zf-Nse
zf-C3HC4_2
DUF4527
MCAfunc
zf-C3HC4
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
104095453
NCBI-ProteinID:
XP_009599897
LinkDB
All DBs
Position
11:complement(117376561..117382906)
Genome browser
AA seq
663 aa
AA seq
DB search
MGEEDKGEIVQKLIETVNEISSINEFRNSVKKQYCNLARRLKLLTPMFEEIRDCKEPLPV
DSLKALVSLKLALQSAKVVLKFGSEGSKIYLVLEREQIMNKFQEVTSQLEQALSGIYYEK
LDISDEVKEQVELVLSQFRRAKGRIETPDVELHEDLFSLYSNCNDAVVDHAVLRRLVDKL
QLTELDDLKQESLALHEMVIATDGDPEERIEKMSMLLKKIKDFVQTENPNIDSSAREKSS
TFSGQASEDGSQKAPVIPDDFRCPISLELMRDPVIVSTGQTYERSCIEKWLEDGHGTCPK
TQQALTSKALTPNYVLRSLIAQWCEANGIEPPKRPGSSRPTKSASACTPAERSKIENLLR
KLKSGSPEEERAAAGEIRLLAKRNADNRVAIAEAGAIPLLVHLLSTPDSRTQEHAVTALL
NLSICEHNKGNIVTSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGSSGAIP
PLVALLSEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVVPTLMRLLTEPQGGMVDEALA
ILAILSSHPEGKAAIGAAEAVPVLVDVISNGSPRNKENAAAVLVHLCSGDQHHLVEAQQL
GLMGPLMDLVQNGTERGKRKATQLLERLNRYAEQQKQPQVQAESQIHHQLSRSPPISTNA
VDS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaagataaaggagaaatagttcagaagctgattgaaacagtgaatgaaata
tcgagcattaatgagttcagaaattcagtgaaaaagcagtattgtaatttagctaggagg
cttaagttgttgactcctatgttcgaagagattcgtgattgcaaagagccactccctgtt
gactcgttaaaagctttggtttctttgaaattagctcttcaatctgctaaagttgtcctc
aaattcggtagcgaaggtagcaaaatttatctggtgctagaaagagagcagatcatgaat
aaatttcaagaggtgacatctcagcttgaacaagctttaagtggaatttattatgaaaag
cttgacatatccgacgaagttaaagaacaggttgaacttgtcctttctcagtttcgaaga
gccaagggaaggattgaaacacctgatgttgaactgcatgaagatttgttttctctttat
agcaattgtaatgatgcagtggtagatcacgctgtcctaaggcggttagtcgataagcta
cagctgactgaattagatgaccttaaacaagaatcactagctttgcatgaaatggtcatt
gccacagatggggatcccgaggagagaatagagaagatgtcaatgctactgaagaaaatt
aaggacttcgtacagactgagaacccaaacattgattcttctgcaagggaaaagtcttca
acgtttagtggacaagcatctgaagacgggagccagaaggccccagttataccagatgat
tttcgttgccctatatccctggagttgatgagagatcccgttattgtctcaactggacag
acctatgaacgttcttgtattgagaagtggctggaagatgggcatggcacttgtcccaag
acccaacaagccctcacaagcaaagctctgacacccaactacgtgctgcgtagtcttata
gcacagtggtgtgaagcaaatgggattgaaccacccaaaagaccaggtagttctcgaccc
actaaatcagcatccgcatgcacccctgctgagcgctcgaagattgaaaatctcctgaga
aagctcaaatctggcagccctgaagaggagcgcgctgctgcaggtgaaatccgccttctt
gctaagcgtaatgctgataatcgtgttgcaatagctgaagcgggtgccattcctctgctg
gtccatcttctctccacacctgattctcggacccaagagcatgctgttacagcacttctt
aacctttccatatgtgagcataataaaggaaacatcgtaacctccggagcagtgcctggt
attgtgcatgtgctcaagaaagggagcatggaagctcgtgaaaatgcagcagccaccctg
ttcagcctttcagttatagatgaaaataaggtcaccattggttcttctggagcaattcct
ccgctcgtggcattattaagtgaaggtacccaaaggggaaagaaagacgccgctacagcg
cttttcaatctatgcatttatcaagggaacaagggcaaggcaataagggctggtgttgta
cctacccttatgcggctgctcacggaacctcaaggtggcatggttgatgaagcacttgct
attttagcaatcttgtcgagccacccagaagggaaggcagctatcggagctgcagaggca
gttcctgttttggtggatgtgatctcaaatgggtctccaagaaacaaagaaaatgcagct
gcagttctagtacacctctgctccggggaccaacatcatctagtcgaagcgcagcaacta
ggtttgatgggtcctttgatggatttagtacaaaatggcacagaaaggggtaaaaggaag
gcaacccaattgcttgaaagactgaacagatatgctgagcagcaaaagcagccccaggtg
caagccgagtctcaaattcatcaccagctgtcacggtcgccacccatatcgactaatgcc
gttgacagttga
DBGET
integrated database retrieval system
