Nicotiana tomentosiformis: 104095537
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Entry
104095537 CDS
T05025
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like isoform X1
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104095537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104095537
Spliceosome [BR:
nto03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
104095537
Complex B
104095537
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Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
104095537
NCBI-ProteinID:
XP_009599979
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Position
9:34276683..34281778
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AA seq
199 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYLKFEEEQTQILIDQKIKERLGQ
AAAYQQIGAAYNQHLAAFPGQRPRLPMIPPPMLPVPGAMPPQLVPGARPPILPIPVPGPP
GYSAVAPTAPIAGPVPPVSSLLLQPSSLPAPPALHPLAGVPGGAAPPTSGNAPVPATQSI
YQPNPNGIAAPSMNATTTS
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtattactgtgactactgcgacacttacttgacccatgattccccttctgtc
agaaaacagcataatgccggttacaaacacaaggccaatgtacggtcttattatctgaag
tttgaagaggagcaaacacagattctgatagatcagaaaatcaaggagcgccttgggcag
gcagcagcataccagcaaattggtgcagcttataatcaacatcttgctgcattccctggt
caacgacctcgcctaccgatgataccacctcctatgctgcctgttccaggagccatgccc
ccacaattagtgccaggtgccagacctcccattttgccaattcctgttcctggtcctcca
ggttattccgcggttgctccaactgcaccaattgcaggaccggtgccacctgtttcatcc
ttgctgctgcaacccagttctcttcccgctcctcctgcactgcacccccttgcaggtgtt
ccaggtggagcggctccacctacttcaggcaatgcccctgttcctgccacacaatcaatc
taccagccaaatcccaatggaattgccgccccttctatgaatgctacaactaccagctag
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