KEGG   Nicotiana tomentosiformis: 104095684
Entry
104095684         CDS       T05025                                 
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nto03019]
    104095684
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nto04147]
    104095684
Messenger RNA biogenesis [BR:nto03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     104095684
Exosome [BR:nto04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104095684
  Exosomal proteins of colorectal cancer cells
   104095684
  Exosomal proteins of bladder cancer cells
   104095684
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_RIG_2nd Beta-prop_NWD2_C eIF2A PROPPIN Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_DCAF4 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_RSE1_2nd WDR54 Beta-prop_NUP159_NUP214 Cytochrom_D1 WD40_like
Other DBs
NCBI-GeneID: 104095684
NCBI-ProteinID: XP_009600162
LinkDB
Position
3:complement(138028661..138030581)
AA seq 328 aa
MAQESLVLRGTMKAHTDWVTAIATPIDNSDMIVTSSRDKSLIVWALTKDGPQYGVPRRRL
TGHGHFVQDVVLSSDGMFALSGSWDGELRLWDLQAGTTARRFVGHTKDVLSVAFSVDNRQ
IVSASRDKSIKLWNTLGECKYTIQEGDSHSDWVSCVRFSPNTLQPTIVSGSWDRTVKIWN
LTNCKLRSTLAGHGGYVNTVAVSPDGSLCASGGKDGTILLWDLAEGKKLYSLDAGSIIHA
LCFSPNRYWLCAATETSIKIWDLESKSVVVDLKVDLKQESEMATEGTTGSACKNKIMYCT
CLSWSADGSTLFSGYTDGLIRVWGIGRY
NT seq 987 nt   +upstreamnt  +downstreamnt
atggcacaagaatcactagtcctccgcggcacaatgaaagcccacaccgattgggtcaca
gccatcgccaccccaattgacaactccgacatgatcgttacctcctccagggacaagtcc
ctaatcgtctgggctctcactaaggacggcccacaatacggtgtcccccgccgccgtctc
actggccacggccacttcgtccaggatgtcgtcctttcctccgacggcatgtttgctctc
tctggttcctgggacggtgagcttcgcctttgggatcttcaagctgggaccacggctcgc
cgtttcgttggtcacactaaggatgttctgtccgttgcattctctgtcgacaaccgtcag
atcgtctccgcttcacgtgacaaatccatcaagctgtggaacactctcggtgaatgcaaa
tacaccattcaggaaggcgactcgcattctgattgggtttcatgtgttcgtttcagcccg
aatacacttcagcccaccatcgtttctggatcatgggaccgtactgtgaaaatctggaac
ctcactaactgtaagctgaggtccactctcgctggacacggtggctacgtgaacaccgtg
gcagtgtctcctgatggttcgttgtgtgctagtggaggcaaagatggtactattttgctt
tgggatttggctgaggggaagaagctctactcgcttgatgctggctctatcattcacgcg
ctctgctttagtcctaacaggtactggctgtgcgcagctactgaaactagcattaagatt
tgggatttggagagcaagagcgttgttgtggatcttaaagttgatctcaagcaagagagt
gagatggctactgaaggaactactggctctgcctgcaaaaacaagatcatgtactgcacc
tgtttgagctggagtgctgatggaagcacgcttttcagtggatatacagacggtttgatt
agggtttggggtattgggcgttattag

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