Nicotiana tomentosiformis: 104095793
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Entry
104095793 CDS
T05025
Name
(RefSeq) nuclear pore complex protein NUP93A-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104095793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104095793
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104095793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
104095793
NCBI-ProteinID:
XP_009600295
LinkDB
All DBs
Position
4:2094625..2106527
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AA seq
863 aa
AA seq
DB search
MANDVDMSGWSELLHSSSKLLEQAAPSAQFPPLQRNLDQLEALTKKLKAKNLRTEAPSQS
IAATRLLAREGINAEQLARDLKSFELKQTTFEDVFPAEATTVEEYLQQIHEMAMVSAVQE
AQKDNLKNFNDYMMKVLENDWKKEKRDFLQSLSRISTLPRTNISESSPLGGRQGQIASLT
YSPQISSGTASVESVPLANRPIVEKKAAAYGEVVKNLNSARERSFPFKPATAFKHALEGL
GLNAYGGKSVGIQKIWHLMSALMGEDPAFQHNISKKMSLVIGARRHLEWGHEKYVMETIQ
AHPAQAALGGAVGNLQRIRAFLRIRLRDYGVLDFDAVDARRQPPVDTTWQQIYFCLRTGY
YNEAKEIAQLSRMSHQFAPLLTEWISSGGMVSAETAAIASEECEKMLRLGDRAGRPMYDK
KKLLLYTIISGSRRQIDRFVREFPTLFSTIEDFLWFKLSAVRESPVRSSVVLNEGLAPYT
LDDLQAYLNKFEPSHYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKDMGDEGYNVDAAHMA
IVLADYGVLSEGTGLGQKSGAMDAFAEASSIIRQYGSFYLRHGDMVMALEYYVQAAAAVG
GGQLSWSGRGNMDQQRQRSSMLKQLLTELLSRDGGIDILLGPRGTGEEGQLGRFLTDEKT
RQQFLLDAARQYQDAGLYDKSIEIQKRVGAFSAALDTINKCLSDAICALARGRLDGDSRI
SGLILSGNEILDMFKYYPDISPQERENVLAQQIVLRQLEAVLSIHKLARLGNHLDAIKEV
AKLPFLPLDPRTPDFATDVFKKLSHHVQVCVPDLLKVALHCLENVRDTDGSLRALRDKIA
NFLANNMNQNWPRDLYEKVARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgatgtagacatgagtgggtggagtgagcttctacactcttcttcgaagctt
ctagaacaagccgctccttctgctcagttccctcctcttcagaggaatttggatcaattg
gaagcattaacgaagaaattgaaggctaaaaatctaagaactgaagctccttctcaatct
attgctgcgaccaggctactagctcgtgagggcatcaacgcagagcagcttgctcgtgat
cttaagtcttttgagttaaagcagacgacatttgaagatgttttccctgcggaggcaaca
actgttgaagagtatctgcaacagatccatgaaatggcgatggtctctgctgttcaagaa
gctcagaaggataacctaaaaaatttcaatgattacatgatgaaagttctggagaacgac
tggaagaaggaaaaaagggacttcctccagagcctaagccgaatttcaaccttacctagg
accaatatcagtgaatcaagccctttaggtggtcgtcaggggcaaatagcgtctttgaca
tatagccctcagatttcgtctggtacagctagcgtggagtctgtaccattagccaatagg
cccattgttgagaaaaaggctgctgcatatggagaagttgtcaagaatctcaatagtgca
agagagcgtagttttcccttcaaacctgctacagcttttaagcatgctcttgagggtttg
ggtctcaatgcatatggtgggaagtcagttggcattcagaagatctggcatctaatgtcg
gcattgatgggtgaagatccagctttccaacataatatttcaaagaaaatgtccttggta
attggagctagacgccacctagaatggggtcacgagaagtatgtcatggaaacaattcaa
gctcatcctgctcaggccgcacttggtggtgctgttggtaatttgcagagaatccgcgcc
tttctcaggatccgtctaagggactatggggtccttgattttgatgcggttgatgcccgt
agacagcctcctgttgataccacctggcagcagatatacttttgcttgagaactggctac
tacaatgaagcaaaagagattgcccaactatctcgcatgtcccaccagtttgctcctctg
ctgacagagtggatttccagtggaggcatggtatcagcagagacagcagcaattgcttca
gaagaatgtgagaagatgttaaggttgggtgatcgagcaggtcgaccaatgtacgataag
aaaaagttgctactctacaccataatatctggttcccgtaggcaaattgacagatttgtt
cgagaattccctacacttttctctactatagaggatttcttgtggttcaaattatctgct
gtacgtgagagtcctgtcaggtcttctgttgtcctaaatgaggggttggcaccttacact
ttggatgatttgcaagcttacctaaacaagtttgagccatcacactacactaagaatgga
aaggatcctttggtttatccgtatgttttacttttaagcatccagctacttccagccgtc
ctttatttgtccaaggatatgggagatgaaggatataatgtagatgctgctcatatggct
attgtgttggcagattatggagtcctctctgaaggtacagggttagggcaaaaatctggg
gccatggatgcttttgctgaagcttctagcataattaggcagtatggatcattttacctg
cgtcatggtgatatggtaatggcattggaatactatgtgcaagcagcagcagcagttggt
ggtgggcagttgtcatggagtggacgtggtaatatggatcagcaaaggcaaaggagctca
atgttgaagcaacttcttacagagcttttgtcgcgagatggtggtattgatattttactt
ggtccaaggggtactggagaagaaggtcaacttggaaggtttttaacagatgaaaagaca
agacaacagtttctgctggacgctgctcggcagtatcaggatgcggggctttatgacaag
tccatagagattcaaaagagagtgggggcattttcagctgcattggatacgataaacaag
tgcctttctgatgcaatatgtgccttggcacgtggaaggttggatggggatagccggata
tctgggctcattctttcaggaaatgagatcctggatatgtttaaatattaccccgacatc
agtccccaagagagagagaatgtgttggcgcaacaaattgttctaagacagctggaggct
gtgctatctattcataagcttgcaagacttgggaatcacttggatgctataaaggaagtg
gctaagctcccattccttcctttggatccaaggacgccagatttcgccacagatgtcttt
aaaaaattgtctcaccatgtccaagtttgtgtaccagacctcctaaaagttgcgcttcat
tgcctggagaatgttagagatactgatgggtcacttcgtgctttaagggacaagattgca
aacttcctcgcaaacaatatgaatcagaattggcctcgtgatctgtatgaaaaggttgct
cgcagtttgtga
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