Nicotiana tomentosiformis: 104095797
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Entry
104095797 CDS
T05025
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104095797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104095797
Spliceosome [BR:
nto03041
]
Common components
Common spliceosomal components
SR proteins
104095797
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RNA_bind
RRM_Nup35
SET_assoc
DUF2129
Motif
Other DBs
NCBI-GeneID:
104095797
NCBI-ProteinID:
XP_009600303
LinkDB
All DBs
Position
3:81364849..81369563
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AA seq
412 aa
AA seq
DB search
MQLLIKNLTIVSKRYFHSASALRLLLQLGFSILQNGRMRPIFCGNFEFDTRQSELERLFK
RYGKVDRVDMKSGFAFVYMDDERDAEDAIQGLDRIDFGRKGRRLRVEWSKEERSRKPEVS
RKSSSSFRVSKTLFVINFDPYNTRTRDLERHFDPHGKILNIRIRRNFAFIQFESQEDATR
ALDATNMSKLMDRVITVEYAIKDDDDRRDGSGPGKTHDRSPRRGYDRGRSRSPYGRDRPS
PDYGRGRDRPSPDYGRGRDRLSPDYGRGTNRLSPDYGRGRDRLNPDYGRGPSPSPKHRER
NSENARGHSPAVGKERNPGHGNGRTPSPRRERAGPGNGLVSSPMESRSPGYGDRPSPSPQ
RERRKKYSPDGYNPGSSPSSKPGPVESPVRDGRESSERYRSRSPPLRERSRS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcagctacttataaaaaacctgacaatagtatcaaagagatattttcactcggcctct
gcattgcgcttgttgttgcagttagggttttctatactacagaacggcaggatgagacca
attttctgtggtaactttgagtttgacaccagacagtctgagttggaaaggcttttcaaa
agatatggcaaggttgatagggtggatatgaaatctggttttgcttttgtttatatggat
gatgaaagagatgcagaggacgctattcaggggcttgaccgaatagattttggcagaaag
gggcgcaggcttcgtgttgagtggtcaaaggaagaacggagcagaaagcctgaggtttct
agaaaatcttcatcaagtttcagagtttccaagactttgtttgtcataaattttgatcca
tataatactaggacgagggatctggagaggcactttgatccacatggaaaaatactcaac
ataaggatccgaaggaattttgcatttattcaatttgaatcacaggaggatgccactaga
gccctggatgctaccaatatgagtaagctgatggatcgagttattactgtggagtatgcg
atcaaagatgatgatgataggagagatgggtccggtccaggtaaaacccatgatagatca
cctaggagaggttatgaccgaggtcgatctcgtagcccttatggaagagatcggccaagt
cctgactatggccgtggtcgagatcggccaagtcctgactatggtcgtgggagagatcgg
ctaagtcctgactatggtcgtggtacaaatcggctaagtcctgactatggtcgtggcaga
gatcggctaaatcctgattatggtcgtggccctagtccaagtccaaagcatagagaaagg
aattctgagaatgcccgtggccatagtccagctgtaggaaaggagagaaatcctggtcat
gggaatggtcgcacccctagccctcgtagagaaagagctggtccaggaaatggcctcgtg
agcagtcctatggaaagcagaagtcctggttatggtgatagacccagtcctagtcctcaa
cgtgagaggagaaagaaatatagcccggatggttataatcctggcagcagcccaagttct
aaaccgggacctgtagaaagtcctgtacgtgatgggagggaaagttcagagcgatacagg
agtcgttcacctccattgcgggaaagatcacgctcctaa
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