Nicotiana tomentosiformis: 104096271
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Entry
104096271 CDS
T05025
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104096271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104096271
Spliceosome [BR:
nto03041
]
Common components
Common spliceosomal components
SR proteins
104096271
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
DUF2457
Motif
Other DBs
NCBI-GeneID:
104096271
NCBI-ProteinID:
XP_033512027
LinkDB
All DBs
Position
10:23699696..23712287
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AA seq
294 aa
AA seq
DB search
MSGRFSRTIYVGNLPADIKEWEVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED
AIRGRDGYNFDGCRLRVELAHGGRGPPSSSDRRGGYGRSDGGGRHGISRHSEYRVIVRGL
PSSASWQDLKDHMRKAGDVCFSEVSRDSEGTFGLVDYTHYDDMKYAIRKLDDTEFKNPWT
RTYIRVREHKRSPSRSRSRSRSRSPRGSRSRSRSRSRSRIPKRRSKSAGRSVLRSPPAKS
RSASPVKSTRPRSRSKSKSKSRLRSASPRQGALSLYLVADHRGWIFESSLLLMP
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccgtttttctcgcacaatctatgttggcaaccttcccgcagatataaaagaa
tgggaagttgaagatctattctacaagtatgggcgtatactggatgttgagttgaagatt
cccccgcgtcctccttgctattgctttgtagagtttgaaaatgctcgtgatgctgaagat
gctatcaggggtagagacggctacaactttgatggctgtcgtctgcgggttgagcttgct
catggtggtagagggccgccatcttcaagtgatcgtcgtggtggctatggccgcagtgat
ggtggagggcgtcatggcatttctcgccattctgagtatcgagttattgttcgtggcctc
ccatcttctgcttcctggcaagatttgaaggatcatatgcgaaaggctggcgatgtttgc
ttttctgaagtttcccgtgacagtgaaggaacctttggcctggttgactatacacactat
gatgacatgaaatatgctattcgcaaacttgatgatacagagttcaaaaatccttggaca
cgaacctatatccgggtaagagaacacaagcgaagtccatccagaagccgcagcaggagc
aggagcagaagtccgagggggagcagaagcagaagcagaagcagaagcagaagcagaatt
ccgaagaggaggagcaaatcagctggaagatctgttttgagatcaccgccggcgaagtct
agatctgcatctcctgtgaagtcgactagacccaggtccaggtccaagtccaagtccaag
tccagattaaggtcggcgtcccctcgtcagggtgccttgtctttatacctcgtggcagac
catcgtggatggatatttgaatcgtcgcttctgctcatgccttaa
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