Nicotiana tomentosiformis: 104096496
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Entry
104096496 CDS
T05025
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104096496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104096496
03036 Chromosome and associated proteins [BR:
nto03036
]
104096496
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104096496
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104096496
PBAF complex
104096496
GBAF(ncBAF) complex
104096496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
104096496
NCBI-ProteinID:
XP_009601171
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MSVNNNNNPNKNMGGSSSFGNSPPSNPIAHLQSQSQPQQQMPSGFPGSFQLSQLTAAHAQ
AIAQAQSKVQAQAHAQAQAQAAHAQFQAQLQAQGLSLNQAHALGNFGSASASAKRLPQKP
PVRPPAFAAANTVSPMRTMELSSAARRKKQKLPEKHLHEKVAAILPESALYTQLLEFESR
VDSALARKKVDIQEALKNPPTIQKTLRIYVFNTFANQIRTIPKKPNAELPTWTLKIVGRI
LEEGMDPDQAAMFQKSSSMYPKFSTFFKRVTISLDQKLYPDNHIIIWDSARSPAPQDGFE
VKRKGEQEFTVNLRLELNYMPEKYKLSPALTEVLGIEVETRPRIISSIWHYVKARKLQNP
DDPSYFNCDPPLQKVFGEGKVKFTAVTQKITPHLSPPQPIHLEHRIKLSGNNPAGTACYD
VLVDVPFPIQRELNALLANTEKTKEIEACDEAICGAIRKIHEHRRRRAFFLGFSQSPIEF
INALLESQTKDLKVVAGEASRNAEKERRSQFYSQPWVEDAVIRYLNRKPASDAPGSG
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttaacaacaacaataaccctaacaagaacatgggaggatcatcctcctttggc
aattcacctccttcaaacccaattgcacacctgcaatcccaatcacaaccccaacaacag
atgccctccggatttcccgggtcatttcagttatctcagctcactgcagctcatgcccaa
gccattgctcaagcacagtcgaaagtccaagctcaagcacacgcgcaagctcaagcacaa
gctgcccatgctcagtttcaggcccagttacaagctcagggtctgtcccttaaccaagcc
catgctcttggcaattttggttctgcaagtgcctccgcaaaacgcttgcctcagaaacct
ccggtgcgcccacctgcattcgccgctgctaacacggtttccccaatgagaactatggag
ctttcgtctgctgcgagaaggaaaaagcagaagcttcccgagaagcacttgcacgagaag
gtggctgcgattttgcccgaatctgcactttatactcagctccttgagtttgaatctcgg
gttgattctgccttggcaagaaagaaagttgacatccaggaggctttgaagaatccgcct
actattcagaagacgcttcgtatatatgtattcaatacttttgctaatcagattcgtact
attcctaagaagccgaatgctgaactgcctacgtggacccttaaaatcgtaggaaggatt
ttggaggagggaatggatcctgatcaggctgccatgtttcagaaatcaagctccatgtat
ccaaagttttcaacttttttcaaaagagtcaccatttctttggaccagaaactgtatcct
gataaccatattataatttgggattctgcgagatcgcctgcacctcaggacggcttcgag
gtcaagagaaagggagagcaagagttcactgttaatttaagactagaattgaattacatg
cctgagaaatataagctttcaccagctttaactgaagttcttggtattgaggttgagact
cgtccgagaattatctcttctatctggcattatgttaaggctcgaaagttgcagaaccct
gacgatccttcttacttcaactgtgatcctccgcttcagaaagttttcggggaaggaaag
gttaaatttactgcagtcacgcaaaagatcacgccccatttgtctcctccacaacccata
catttggaacacaggattaaactttctggtaataatcctgctggaactgcatgctacgat
gtattggtcgatgtgccatttcccattcagagggaactgaatgctctgctggccaataca
gaaaagaccaaagagattgaagcttgtgatgaagcaatttgtggtgccataaggaagatc
catgagcatcggaggagaagggctttttttcttggttttagtcaatctcctattgagttt
attaatgcacttctagaatcccagaccaaggatctgaaagttgttgccggggaggcgagt
cgcaatgctgagaaagaacggcggtctcagttttatagccaaccatgggttgaggatgct
gttattcgctacctgaatcgcaagccagcttctgatgcccctggaagcgggtga
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