Nicotiana tomentosiformis: 104096903
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Entry
104096903 CDS
T05025
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104096903
Transcription machinery [BR:
nto03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104096903
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
104096903
NCBI-ProteinID:
XP_009601650
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All DBs
Position
3:88307017..88313711
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AA seq
519 aa
AA seq
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MGVVTVSSSASRSPLGLSTSFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS
KENEKRSRRVSKRTERVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEAK
DHQIVKRRQRTRKRIIEGNEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVAS
SQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI
LQVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKY
FQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKV
PFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARHM
TTQEEFINGITDVDGVDGVKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTL
GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctctgcttctcggagtccattgggattgagcacaagt
ttttctgctcatttatgtccacttaaaaggcctgtagttgtatcatttaaaaaagataaa
acgaaaaaaacaactttagttgcacctaaggaatccatatcgttgcctatagaaacatct
aaagagaatgaaaagaggtcaagacgagtatctaaacgtactgagagagtgcatgctgtt
tcaattgatattgaagcatctccaagtacgttagagttggactatagtgaagctgctgcc
aaacttgaaagtatctacaagcgcagtctggaaacagatagttccgatacagaagctaag
gatcatcaaatcgtgaagagaaggcaaaggacgaggaagagaattatagaaggcaatgag
gaagcgaagaagggaattgctgataatgtggtcaagaatcgtcgaaagaagtcaaagcgg
ctgaatcttgaccagaggattgctctgctaaagaataaagaaggtgaattggttgcttca
tcccaaaaaagagaacttaaagaggacaccgaagatgaaaaaattgataagcttgtcaga
gaatattcaggtgctactgacttagcgagcttagactggaagaaaatgaagatccctcca
gtgcttccatcttctgagcatgcgtggctcttcaagttgatgcaacctatgaaggctatc
cttcaagtgaaggagaacttgcaaaatgatttggggcgagaaccaactgacgctgaagta
gctgaggcaacaaatatcgatgcctccgaactacggaaaaatttggaagttggtcgagct
gccagaaataagctgattaagcacaatctacgtcttgttttgttcgtgataaacaaatat
tttcaagattttgctaatgggccaaaattccaagacctctgtcaggcaggcgtcaaggga
ctaattacagctattgatcgatttgaacctaataggaaattcagactgtcaacatatggt
cttttttggataaggcatgccataatacgttctatgacaacctcaagcttcaccaaagtc
ccattcgggcttgaatctatcagagtagaaattcagaaggccaaattgcagctgctattt
gagcttcagaggatgccaacagatgaagagataattgaaagagttagactttcccctgag
agataccatgaagtgatgaaagtatcaaaacctgtcttctctctccatgcaagacacatg
acgacccaagaagagtttattaatggaataactgatgtagatggcgtagatggggttaag
aggaagcaaccagctctactcaggcttgctcttgatgatgtgcttgattctcttaagccc
aaggagagtctagtaatcagacaaagatatggacttgatggcaaaggtaatagaacattg
ggagaaattgcgggtaacctaaatatttcgagagagatggtacggaagcatgaagtgaag
gctctcatgaagctcaagcatccaactcgagtagattatcttcgccggtacatattctaa
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