Nicotiana tomentosiformis: 104096951
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Entry
104096951 CDS
T05025
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104096951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104096951
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104096951
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104096951
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
DZR
Motif
Other DBs
NCBI-GeneID:
104096951
NCBI-ProteinID:
XP_009601706
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All DBs
Position
6:complement(60716222..60723374)
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AA seq
321 aa
AA seq
DB search
MEEMEMDSIECVSSSMDGVEDEEIRSSVSSHQQYSSAKPHHNVIPSGIAPTSVHELLECP
VCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY
SLGCPEIFPYYSKLKHETLCNFRPYNCPYAGSECSVTGDIPYLVTHLRDDHKVDMHTGCT
FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESEARS
YSYSLEVGGNGRKLLWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT
GRIWKEQQNPDGGVCIPNLCS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatggagatggatagcattgagtgtgtatcatcatcaatggatggcgttgaa
gatgaagagatccgatcttctgtttcatctcatcaacaatattcttcagcaaaacctcat
cataatgttataccttccgggattgccccaactagtgttcatgaattgctggaatgcccc
gtttgtactaattctatgtacccgcctattcatcagtgtcacaatggacacacgctttgt
tcaacttgcaaaacaagggtgcacaatcgatgtcccacatgcagacaagagcttggtgat
ataaggtgtttagcgctagagaaggtagcagagtcgcttgaactgccttgcaaatattat
tctttgggctgcccagaaatattcccatattacagcaaacttaaacatgagacattgtgc
aattttagaccatacaattgcccatatgctgggtcagagtgctcagtgaccggagacatc
ccttatttggttacgcatttaagagatgaccacaaagtggatatgcacacaggatgcacg
ttcaaccatcgttatgtaaagtctaatcctcgtgaagtggaaaatgccacatggatgctg
acggtcttccactgtttcgggcagtatttctgtctccatttcgaggcgttccagcttggc
atggcacctgtatatatggcatttctacgcttcatgggtgatgaaagtgaggcacggagt
tacagctacagtctagaggtaggaggaaatggtagaaagctcttatgggagggtacccca
agaagtattcgagatagccaccgcaaggtgagagacagtcacgatggtcttataatccaa
cgtaacatggcacttttcttttctggtggtgaccggaaagagctgaaacttagagttact
ggacggatatggaaggaacaacaaaatccagatggtggggtgtgcataccaaatctctgt
agctaa
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