Nicotiana tomentosiformis: 104097495
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Entry
104097495 CDS
T05025
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
104097495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nto04040
]
104097495
Ion channels [BR:
nto04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104097495
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
104097495
NCBI-ProteinID:
XP_009602358
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Position
3:122197106..122206104
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AA seq
682 aa
AA seq
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MGTLQHHLHRFSKPSLIYDRQKPWWQQILDPNGEFVARWNHIFLFTSFVGLFVDPLFLLL
PIIRETCMSTDNVLGYTILTFRVLVDIFALLQIVMKFRTAFVSKKTRVFGKGELVMDQCL
IAIRYLKNDFAIDLAAALPLPQIVIWFIMPLNGSSATHANHAISLIIMLQYVPRLLVIFP
LNSKIIRNTGVVAKTAWSGAAYNLLLYLLAGHVLGAIWYLMAIERHFSCWKDECAKQQEG
APACYKDYLDCSSLGKPGRQEWSETTEVFKNCDANADISFEFGMFGDANTEEVTSAGIFD
RYFYCLWWGLKSLSSYGQSITTSINIVETLLSSLICLLGLVFFALLIGNMQSYLQSMTAR
LEQWRVKRRDTEEWMRHRQLPEDLQDRVRRFVQYKWVATRGVEEEEILRSLPLDLRRQIQ
RHLCLALVRRVPFFSQMDDQLLDAICECLVSSLNTKDTYIVREGDPVNEMLFIIRGELES
STTNGGRSGFFNSIMLKQGDFCGEELLTWALVPNPNVNLPISTRTVKCLKEVEAFALKAE
KLKFVANQFRRLHSKKLQHAFRFYSHQWRTWGACYIQAAWRRYRRKKLAEELSIEESLYY
TRGMDQEDDYGHEYPEAGYDGGNASDHATESSSQHLGATILASRFAANTRRGKVPRVDPG
ESSLRMPKLFKPDEPDFSDDQR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgggcactctccagcaccacctccaccgtttctccaaaccttccttaatttacgaccgt
cagaagccctggtggcaacaaattctcgatccaaatggcgagttcgttgccagatggaac
cacattttcttgttcacttcctttgtcggtctatttgttgatcctctgtttttgttgctt
ccaattattcgcgaaacttgcatgagcaccgataatgttttgggatacaccatattaact
tttcgcgtattggttgatatcttcgccttgcttcagatcgttatgaagttccgtacggct
tttgtttccaagaaaacccgggtttttggtaagggtgagctggtcatggatcagtgcttg
attgctatccgttacttgaagaacgactttgccattgatcttgctgctgccctcccgctc
ccacaaattgttatttggtttataatgccattgaatggctcatccgccactcatgctaat
catgccatctctttgattattatgcttcagtatgtgccaagattgttagtcattttcccc
ttaaattcaaagattattaggaatacaggtgttgtggcaaagacagcttggtctggtgca
gcatacaatctcctcctgtacttgctggcaggtcatgttttaggagctatatggtatctg
atggctattgagaggcacttttcatgctggaaggatgagtgcgcaaagcagcaggagggt
gctccagcttgttataaagactaccttgattgctcatcacttggtaaacctgggcgtcag
gagtggtcggaaaccactgaggtgttcaagaattgcgatgctaatgctgatataagcttt
gagtttggaatgtttggtgatgcaaatactgaagaagttacatctgctggcatctttgat
cgatatttttactgcctatggtggggtttaaagagcctaagttcgtatggacaaagtata
actacaagcataaacattgttgagacgctcttgtccagtcttatttgtcttctgggtttg
gtcttctttgcactgctgataggcaacatgcagagctatctacaatccatgacagcaaga
cttgaacaatggagagttaaaagaagggacacagaggagtggatgaggcaccgtcaactg
cctgaagatctgcaagatcgtgttcgtcggtttgttcagtataaatgggtagctacaaga
ggtgtagaggaagaagaaatattgcgttccttacccttggatctaaggcgccagattcag
aggcacctctgcctggctcttgttcgtcgtgtccctttcttctcccagatggatgatcag
ctgttagatgcaatatgcgaatgccttgtttcatcattgaacacgaaagacacgtatatt
gttcgggaaggagatccggtgaatgagatgcttttcataattagaggtgaacttgagagt
tcaacaactaatggaggaaggtcaggcttcttcaactccattatgctaaagcagggtgat
ttttgtggagaagaattgctaacatgggccttagtgcctaatccgaatgttaatcttcca
atttcaactcgaacagtgaaatgccttaaagaagttgaagcatttgcacttaaagctgaa
aagctcaagtttgttgcaaaccagttcagacgtctccatagtaagaaattacagcatgca
ttccggttctactcacaccaatggaggacatggggagcttgctacatacaagctgcatgg
agacgctatcggaggaaaaaactagcagaggaattgtcaatagaagagagcttgtactac
acacgagggatggaccaagaggatgattatggtcacgaatatccagaagctggttatgac
ggtggcaatgcttcggatcatgcaacagaaagcagtagtcagcatcttggagctacaata
ttggcatcaagatttgctgctaacaccagaagaggcaaggtgccacgggtggaccctggt
gaatccagcttacgtatgcctaaactctttaagcctgacgagcctgatttttctgatgat
caaagatga
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