Nicotiana tomentosiformis: 104098057
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Entry
104098057 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104098057
03400 DNA repair and recombination proteins [BR:
nto03400
]
104098057
Spliceosome [BR:
nto03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
104098057
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104098057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
KTI12
Zeta_toxin
AAA_18
Motif
Other DBs
NCBI-GeneID:
104098057
NCBI-ProteinID:
XP_009603005
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All DBs
Position
2:78646500..78653456
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AA seq
626 aa
AA seq
DB search
MASTKRESCISDEPEAKKAKVEEGPSQLPVSTPRVALNPADCDLDFNVEGNGLQGSALYE
QGFAYCWSGARANMGITGGKYCFGCRIVSDQPVDMEDTPLDQQHLCRVGISRGDDAVGNL
GETLHSFGFGGTGKFSSHGQFSEYGEKFGVGDTIICCVDLESSPLASIGFSKNGKWLGIA
KQFNAGPTGHEVVDCPMKNLQWHSALFPHVLLKNVVVHMQFSIDDGLAPVEGYRPWSCAM
EDGKAITGPSFLNLCDCEVMMMVGLPASGKSTWAEKWAMKHAEKRYLLLGTNLALDLMKV
PGLLRKNNYGERFERLMDRATGIFNTLLSRASQIPRNFIIDQTNVYKNARKRKLKPFANY
KKIAVVIVPTPEELKLRGEKRFKEMGKEVPAEAVNEMLVNFVLPTSKDMPRADEYFDEVR
FKELGRAEAQRCLDEMKANVNSKREVTPYSRESSVQSLNNPSMQCHCQSYCGSSLLSHKN
LSGGHLNSSYAQPPLQAPRETYFATPSSYDPMGDFGHGSRSAYDNSRGYEMEAQSAIHGG
VYEPHGGYGAWNAAELHRSSMNDPYLRTTGGPRYLPPDSRGPAFESRMPAPYGFPHGIPA
PRPPYGNFPSGAQHPGVYTPPRPGYY
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacgaaacgtgaatcctgtataagcgatgaacctgaagccaagaaagcaaag
gttgaagaagggccatcacagcttccagtatccacaccccgtgtggcccttaaccccgcc
gattgtgacttagatttcaatgttgaaggaaatggattacaaggttcagcgctttatgag
caaggatttgcttattgttggtcaggtgctcgagccaatatgggaatcactggaggaaag
tactgctttggttgcagaatcgtttcagatcagcctgtagacatggaagatacaccacta
gatcagcaacatctttgtcgtgttggcatctcaaggggagatgatgcagtaggaaacctt
ggggaaacccttcatagttttgggtttgggggtactggaaagttttctagtcatggacag
ttttctgaatatggtgaaaaatttggggttggtgacaccataatttgttgtgttgacctt
gagtctagccctttggcatccataggtttctctaaaaatgggaagtggctgggaatagca
aagcaatttaatgcaggtccaactggccatgaagtggtggattgtccaatgaaaaatcta
caatggcattcagctcttttccctcatgtcttgcttaaaaatgtagttgtgcacatgcag
tttagcatagacgacggattagctcctgtggaaggatatagaccatggtcttgtgccatg
gaagatgggaaagccataacaggccctagctttctgaatctgtgtgattgtgaagttatg
atgatggtgggactgcctgcttccggcaagagtacctgggctgagaaatgggcgatgaaa
catgcagaaaagcgatatcttttgcttggaactaatttggctttggatctaatgaaggtt
cctggtttgctgcgcaaaaataactatggtgaaagatttgaacgtttaatggaccgtgct
actggtatattcaacactcttttgtctagggcttcccagattcctcgtaatttcataatt
gatcagacaaatgtctacaaaaatgcccggaagcgcaaattgaagccttttgcaaactat
aagaagattgctgttgtgattgttccaacacctgaagagctcaagctccgtggtgagaag
cgattcaaagaaatgggcaaggaggttcctgccgaagcagtaaatgaaatgttagtgaat
tttgttttacctacgagcaaagatatgcctcgagcagatgagtactttgatgaggtacgt
tttaaagaacttggcagagcggaggctcagagatgcttggatgagatgaaagcaaacgta
aattcaaagagggaagttaccccttattctcgtgaaagttctgtgcagtcacttaataac
ccatcaatgcagtgccattgccaatcatactgtggttcctcattgctgagtcacaaaaat
ttatcaggtggacatctaaatagttcatatgctcagcctccactgcaagcacctcgtgaa
acctacttcgcgaccccttccagttatgaccccatgggtgattttggtcatggaagtcgc
agtgcctacgacaattcaaggggatatgagatggaagctcaatcagctatccatggaggg
gtttatgagcctcatgggggatatggagcttggaatgcagctgagttacaccggagcagc
atgaatgatccctacctaagaacgactggtggtccaagatatctgccacctgactcaaga
ggacctgcatttgaatcgaggatgccagcaccatatggctttcctcatgggattccagct
ccaagaccgccatatggaaattttccttccggagcacagcatcctggagtatacactcca
cctcgtcccggatactactga
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