Nicotiana tomentosiformis: 104098060
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Entry
104098060 CDS
T05025
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104098060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104098060
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104098060
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
104098060
NCBI-ProteinID:
XP_009603009
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Position
2:78698159..78704486
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AA seq
584 aa
AA seq
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MNPSLKKSRESVDSLNESTASPFPDEVLEKVLSLVRSHKDRNSASLVCKDWYNAERWTRT
KLFIGNCYSVSPDIVARRFPKIKSVTLKGKPRFSDFNLVPENWGADIQAWLDVFSKVYPF
LEELRLKRMTVSDESLEFLAKSFHGFKTLSLLSCDGFSTDGIKSIATHCKRLTELDIQEN
GMDDIAGSWLSCFPDDFASLEVLNFASLNSEISFDALERLVSRCKSLRVLKVNKNINLDQ
LQRLLVRAPQLMELGTGSFHQELTSRQYAQVESAFSNCKHLHTLSGLWEATSLYLPVLYA
ACASLTFLNLSYATIGSGELSKLLAHCPNLRRLWVLDTVEDKGLEAVGTSCPLLEELRVF
PADPFDQDIVHGVTESGFVAVSAGCPKLQYVLYFCRQMTNAAVATIVRNCPDFTHFRLCI
MNPGQPDYLTNEPMDEAFGAVVKTCTKLQRLSVSGLLTDQTFEYIGKYAKNLETLSVAFA
GSSDWGMQCVLDGCSKLRKLEIRDCPFGNAALLSGLDKYESMRCLWMSACNVTMNGCRLL
AKEMPRLNVEVIKDEDSDDYADKVYVYRSVAGPRRDAPPFVKTL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagcttgaaaaaatcgagggaatcggtagattcattgaatgagtcaacagcg
tcaccattcccagatgaggtgttggagaaggtgctgtcacttgtgcggtctcacaaggac
agaaactcagcttcattggtttgcaaagattggtacaatgcagagcgttggacaaggact
aagttgtttattgggaattgctattcggtctctcctgatattgtagcaagaagatttccc
aagattaagagcgttacccttaaagggaagccaagattttctgactttaatttggtccca
gagaattggggtgctgatattcaggcttggcttgatgttttttccaaagtttaccccttt
cttgaggagttgaggttgaagaggatgactgttagtgatgagagtttggagtttttggct
aaatcctttcatggatttaagactctctctttgttgagttgtgatgggtttagcactgat
gggatcaaatccattgctactcactgcaagaggttgacagagctggacattcaggagaat
ggcatggatgatattgctggtagttggctaagttgtttcccggatgactttgcgtcactg
gaggtgttaaactttgccagtctgaacagtgagatcagtttcgatgccctagagagactt
gtcagtaggtgcaaatcactgagggttctgaaggtgaataagaacattaacttggatcaa
ttgcaacgcctgcttgtccgggctcctcagttgatggagctcggtacaggatcctttcat
caagaactcacgagtcggcagtacgcacaagttgaaagtgcattcagcaactgcaaacat
ctgcacactctctcgggtttatgggaagcgacttctctatatttaccagttctttatgca
gcctgtgctagtctgactttcctcaacttgagctatgcaaccattgggagtggtgaatta
tcgaagcttcttgctcattgcccaaatttaagacgcctttgggtccttgacactgtcgaa
gataagggattagaggctgttggaaccagctgccccttgctcgaagaactgcgagtcttt
cctgctgacccttttgaccaggatatagtccatggggtgacggagtcgggctttgtggct
gtgtctgccggttgtcctaagcttcaatatgttctctatttttgccggcaaatgactaat
gctgctgttgcaacgatagtgcgtaactgccctgatttcacccattttcgtctctgcata
atgaatcctggccaaccagattacctgacaaatgaacccatggatgaggcttttggtgca
gtggtcaagacttgtacaaagctccagaggctttccgtttctgggctgttaactgaccag
acctttgagtatatcggtaagtatgccaaaaaccttgagacactttcagtggcttttgct
gggagcagtgactggggtatgcagtgcgtgcttgacggctgttctaagctgaggaagctg
gagataagggattgtccatttggaaatgcagcacttctttctggactggacaagtatgaa
tccatgcggtgtctttggatgtcagcttgcaatgtcaccatgaatggttgtcggttactt
gcaaaagagatgcctagattgaatgtcgaagtaatcaaagatgaggacagcgatgactac
gctgataaggtgtatgtctatcgttctgtagcagggccacgaagggatgctccacctttt
gttaaaactctttag
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