Nicotiana tomentosiformis: 104098402
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Entry
104098402 CDS
T05025
Name
(RefSeq) YTH domain-containing protein ECT4-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104098402
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104098402
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
104098402
NCBI-ProteinID:
XP_009603417
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All DBs
Position
3:46457934..46465083
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AA seq
662 aa
AA seq
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MAAVVPSSDQTADLLQDLHLDSENKSLQARDSTKQVSSVQYAPVEPGTMANGMNKPFERS
TSPFNQDFTGPSMFYSPNGYTSPTYPSSTYYYGGYDGSSGNEWDGFASADGVEMPQGMFG
DYQHGYGYAPYGTYSPSGSHVGHDRQLYGPQQYQYPSSYFQSASSTSGSYPSNQGNTSQT
AVSPSVAPDQVRFPAESTEANQSRVGSTVTHRTNTSKSVRPTYQNSSAKSSDSYGWGGMP
SVSPWVSSAVPRGSNFSSGGTQNLRPLPHSVGMQHPRASSAMGGYMNQMYPNNRMYGQYG
NAFRSGLGFSPSIYDLRTGGRDWLVADHKYRPRGRGNGLSANSNESADGLNELNRGPRGK
GFKDQKDSEPISLAVKGQSLPLKGNCDEDNLPLFPDREQYNRDDFPETYTDAKFFVIKSY
SEDDIHKSIKYGVWASTPNGNKKLDAAYREAEEKSGGCPVFLLFSVNASGQFVGLAEMIG
PVDFDKTVEYWQQDKWNGCFPVKWHIVKDVPNIILRHITLENNENKPVTNSRDTQEVKSE
LGLQILQIFKTHSSKTCILDDFDFYEGRQKIMQEKKAKQRQLNKQVGNVNQSAASTQITE
QDRPIDKEWSKIPASSGGSTGLPRSEDGELKPSEEIRSTTAAKDQPNAKDNEVLLNGTGS
AC
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgttgttccttcctcagatcaaacagcagatttgctacaggacttgcatttg
gattccgagaataagtcccttcaagctcgtgactcaacaaagcaggtttcatctgttcaa
tatgcacctgttgaacctggcaccatggcgaatggaatgaacaagccttttgagagatca
acaagcccctttaatcaggatttcacagggccaagcatgttttacagcccaaacggatac
acatctccaacatacccttcttcaacatactattatggaggttatgatggatcatcaggc
aatgagtgggatggatttgcaagcgccgatggagttgaaatgcctcaaggcatgttcggt
gactatcaacatgggtatggttatgcaccatatgggacatactccccatcgggttcgcat
gttggacatgataggcagctctatggccctcagcaataccaatacccatcgtcttatttt
cagtccgcttcttcgaccagtggatcttacccttcaaaccaaggtaacacttcccagaca
gcggtttcaccttctgttgcacctgaccaagtgcgatttccagctgaatcaaccgaagca
aatcagagtcgtgtagggagtaccgtgactcatcgaaccaatacgtcaaagtctgtaaga
ccaacttaccagaattcttctgcgaaatcctctgattcctatggttggggaggcatgcca
tcagtaagtccttgggtctcttcagcagttcctcgtgggagcaatttctcttctggaggt
actcaaaatctgcgtcctcttccacattcagtgggtatgcagcatccaagagcgtcatct
gcaatgggaggatatatgaatcagatgtatcctaacaatcggatgtatggccaatacgga
aacgcgtttagaagtggtttaggattttcacctagtatttatgatcttaggactggtggt
cgtgattggttggttgctgatcacaagtatagacctcgtggccgtggtaatgggttatct
gccaacagcaatgaaagcgctgatgggttgaatgaattgaacagaggaccccggggaaag
ggtttcaaggaccagaaggattctgaacctatatccttagcagttaaggggcagagtctt
ccactaaaaggcaactgtgatgaggataatctaccccttttcccagatagggagcagtac
aacagagatgatttccctgaaacatacacagatgcaaagttctttgtcattaaatcatac
agcgaggatgatattcacaaaagcattaaatacggtgtatgggcaagcacacccaacggt
aacaagaaactggatgcagcttacagagaagctgaggagaagtctgggggatgtcctgtt
tttctgctgttttctgtcaatgcaagtgggcagtttgttggtcttgcagagatgattggt
ccagttgactttgataaaactgttgagtattggcagcaggacaagtggaatggttgcttt
ccagtgaagtggcatattgtgaaagatgttcctaatatcattttgaggcacattacattg
gaaaacaatgaaaataaacctgtaaccaacagcagagatactcaggaggtaaaatctgag
ctgggtcttcaaatacttcaaatattcaagacacattccagcaagacatgcattctagat
gactttgatttctatgaggggcgtcagaagataatgcaagagaagaaagctaaacagcgt
caactgaataaacaggttggaaatgtcaatcaatctgctgcttcgacccaaataactgag
caagataggccaatagataaagaatggtcaaaaatacctgcttcatctgggggttccact
ggtctacccagatctgaagatggggaactgaagccatctgaagaaataagatcaaccaca
gctgccaaagatcaaccaaatgctaaagacaatgaagtcttattgaatggaacgggaagt
gcttgctga
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