Nicotiana tomentosiformis: 104098484
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Entry
104098484 CDS
T05025
Name
(RefSeq) nuclear pore complex protein NUP160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104098484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104098484
03036 Chromosome and associated proteins [BR:
nto03036
]
104098484
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104098484
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104098484
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
DUF8816
Motif
Other DBs
NCBI-GeneID:
104098484
NCBI-ProteinID:
XP_009603526
LinkDB
All DBs
Position
1:23965859..23999796
Genome browser
AA seq
1488 aa
AA seq
DB search
MGSRSRLAGMEVPIIGSDSVKFVQLSLASSTSTSASAPTPFTRDVGSCSIIGNPPAYFTW
KICRSQPNVLEIMEFCGYKEFPKTGLQIVFPEELFPFALICKNEMTFSSVRPYLLHAMTV
SGVAYLIRLENISNYVSSSRLQSDDFVEFNTLTHPHQGATTAVAGIAELMVVGRSDGSVG
CFQLGILDHRAPGFVQELRDDGGLGRLWGVLSRGRSIAAVQDLVISEFHQKKLLFVLHSD
GSLRVWDLSNHSRIFSHSLSASPSAGSSFVRIWVGNDHNNPDAIPLAVLRKDDSEVGTAM
ISLYSLYFSPGDRINLLLDPSTKSISLVEPQGEVIDVKLTPNKLWILSENGLVMKELFCQ
SRKEELAYCYSLQDTFVAEQLFQGSENSSDDLLWLCHTVLSSSKDQISPFVSSVFLRRLL
LPGVYHRNVLRATLRDFSKHFTDSEFDSLTVDGLKNEILSVIQHEVGADSPISILQSWKT
FCTCYFNNWCRTNVACGLLIDSATQAVGVIRKNSVSICRSLEDIELLVSRSSDEHGNVIS
SGLDSSNNDLEREILSEILQCVRNLSQQLSKAAPTIFYESLLRTPNLSSEEVISRLLKNL
ESGYSSSMAALHVSELGTDVALDKEISYHKRLRKFSVDMLLSLHNLCSRATKWGRVLHVI
ESYLKFLVPRKYEHNLDSDGLFTVSTALTVQATSQVAKVMFESALDVHLLLSYMVNSSSQ
IGMSEDEVSRVKIELVPMIQEVLTEWHIIHFFSTTPSESPLLEDFSSQLSSLQLDGNVDR
RSWNEKLGKSEFTLAFILLLGGHSSPSFRHLPDPSSLSSSVQEFASWIIWGRTGAEPSVF
FSHSVGLALVLLRHGQYDAVEYVLGLVDTYSRKEKIFQSLQSDGGEWSTLLHLLGCCFIA
QSQRGLHGTMKERKISEAVRCFFRAASVGGAANSLQSLPNEAGWIHLGFSQHVSPAAWKL
HYYQWAMQIFEQHNMREAACQFALAALEQVDEALGSGILDESATAVKGRLWANVFKFTLD
LNYYYDAYCAIISNPDEESKTICLRRFIIVLYERGAVKILCDGQLPFIGLSEKVERELAW
KAERSDVSAKPNPFKLLYAFAMQRHSWRRAASYIYLYSAQLRIHGALRDPQRRSFILQER
LNGLSAAINALQLVHPAYAWIDAPLEETCSNMYPSKKARITVEEQSPGTGAQSQRQRSYL
DVEKLENEFILTSAEYLLSLANVKWTFARIEAPPTDVIDLLVESNLYDMAFTLILKFWKG
SALKRELERVFAAMSLKCCPKGLQAPSVGNGQRMHSLLLTSSQDEIVVHESPNVGPAAHE
SKGSSQWETLELYLEKYKKFHAKLPVVVADTLLAADPQIELPLWLVQMFKGVPAKSGWGM
AGSESNPASLLRLYIDYGRYTEATNLLLEYIESFASLRPADIIRRKRPFAVWFPYSLIER
LWCQLQQSIKLGHMVDQSEKLKKLLQGALVNHLHQLKVDSDDVMSSAV
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtaggtcgcgtttagcaggtatggaagttcccattattggcagcgattcggtc
aagttcgttcaactctccctcgcttcttctacttctacttccgcttctgctccaactcct
ttcacaagagatgtcggttcttgctccatcattgggaatcctcccgcttatttcacttgg
aaaatttgcagaagtcagccaaatgtgctggaaataatggagttctgtggttataaggag
ttccccaaaactggattgcaaattgtattcccagaagaactttttccatttgcgctgatc
tgcaaaaatgaaatgacgttttcttctgtcagaccgtatctgcttcatgccatgacagta
tctggggttgcttatcttattagacttgaaaacatctccaattatgtatctagctcccgt
ttgcaatccgacgactttgttgagttcaacactctgacccatcctcatcaaggagcaaca
acagcagtggcaggaatagcagaattgatggtagttggaagaagtgatggatctgttgga
tgcttccagcttggcatccttgaccaccgagctccaggctttgtgcaggagctgcgtgat
gatggtggtcttggtcgtttgtggggcgttttgtcaaggggcaggtcgattgcagcagtg
caggatctagtaatatctgagttccaccagaaaaagcttttatttgtgcttcactctgat
gggagcttacgtgtgtgggacctttcaaatcattccagaattttcagccattctttgagt
gcttcaccatctgcaggctccagttttgtaaggatatgggtgggaaacgaccacaacaat
cctgatgcaattcctctggcagtactacgaaaagatgattcggaagttggcacagcgatg
atctctttgtatagcctttatttcagtcctggggatagaattaacttgttactggatcct
tccacaaaaagcatctcattggtagagcctcagggtgaagtcattgatgtaaaacttact
ccaaataagctgtggatactcagcgaaaatggattggtcatgaaggagttgttttgtcaa
agtaggaaagaggaattagcttattgctattctttacaggatacatttgttgctgagcag
ctgtttcaaggctctgaaaattcttcagatgatctactttggctttgtcacacagttttg
tcatcttcaaaggatcagatttctccatttgtatcttctgttttcttacgtaggttgctc
cttccgggtgtttatcatagaaatgttcttcgggcaacattacgagattttagcaagcac
ttcactgattccgaatttgattctttgactgtggatggactgaaaaatgaaattctgtca
gtcattcaacatgaggtgggagctgatagtccaatttcaatacttcagagctggaaaacc
ttttgtacctgctatttcaataattggtgcagaaccaatgtagcgtgtggtttgcttatt
gattcagccacacaagctgtgggtgttattagaaaaaactcagtctccatttgtcgtagt
ctcgaggacatagagcttcttgtttctagatcttctgatgaacatggaaatgtaataagc
tctgggttggactcctctaataatgatcttgaacgggaaattctttcagagatactgcag
tgtgttcgtaatctcagtcaacagttgagcaaagctgctcctaccatattttatgaatcg
cttcttagaacaccaaatttatcatctgaagaggtcatttcacggttgcttaaaaattta
gaaagtggttatagctcatcaatggcagctctccatgtatccgaactcggaactgatgta
gcactggataaggaaatttcctaccacaaaagactcagaaaattctcagtagatatgctt
ttatccctacacaacttgtgcagtagagctaccaaatgggggagagttttgcatgttatt
gagagctacttgaaatttctcgtgcctcgaaaatatgaacataacttggattctgatgga
ctattcacagtcagcactgcccttacagtgcaggcgacttctcaggttgctaaagtgatg
tttgaatctgcattggacgtgcatttgcttctaagctacatggttaacagtagcagtcag
attggcatgtcagaggatgaggtttcaagagttaaaattgagttagttccaatgatccaa
gaggttcttactgagtggcatatcatccatttcttcagtaccacaccatctgaatctcct
cttcttgaagacttcagcagtcaactttcatctttacagcttgatggcaatgttgatcgg
agatcatggaatgagaaacttggtaaatctgaattcacattggccttcattctgttactt
ggaggtcatagcagtccatctttcagacatcttcctgatcccagcagtctaagtagttca
gtacaagaatttgctagctggataatatgggggagaacaggagcagaaccgtctgttttc
ttcagtcattcggttggccttgctctagtgttacttagacatgggcaatatgatgctgtt
gagtatgtactcggtttggtggatacgtattcgcgcaaggagaagatcttccaaagtctt
cagagcgatggtggggagtggtccactctgttgcatcttcttggttgttgctttattgca
caaagccaacgtggcttgcatggaacaatgaaagaaagaaaaatttctgaagcagttcgg
tgtttttttcgagctgcgtctgtaggaggagctgccaactctttgcaaagcttgccaaat
gaagcaggatggatacaccttggtttctctcaacatgtctcacctgctgcttggaagctt
cattactatcaatgggcaatgcaaatatttgaacaacataacatgagggaggctgcctgc
cagtttgctcttgctgcacttgagcaagttgacgaagctcttggatctggtattcttgat
gaatcagcgactgctgtcaagggaagactttgggctaatgtcttcaagttcacgttagat
ctcaactattactatgatgcatattgcgcaatcatttcaaatccagacgaagaaagcaaa
accatttgtctgaggcgttttataattgttctatatgaacgaggagctgtgaagattctt
tgcgatggccagctaccatttattggcttgtctgagaaggtggagcgagaacttgcttgg
aaggctgagcgttcagatgtttcagccaagccaaacccattcaagttgctctacgcattt
gcaatgcagagacatagttggcggagagcagcgagctatatttacttgtattcagcacaa
ttaagaatccacggtgcattgagagatccccaacggcgatcttttattctgcaggagagg
ctaaatgggctttctgctgctatcaatgctctgcagctggttcatcctgcatatgcttgg
attgatgctccacttgaggaaacttgttctaatatgtatccaagtaaaaaggctaggata
accgtggaagaacagtctcctggtactggtgctcagtctcaaaggcaaaggtcatactta
gatgttgaaaaacttgagaatgagttcattctaacgtcagctgagtatttgctatcattg
gcaaatgtcaagtggacttttgcgagaattgaggcacccccaacggatgtaattgacctt
ttggttgaatcaaacttgtatgatatggcttttacattaattcttaaattttggaaaggg
tcagctttgaagagggaacttgaaagagtttttgcagctatgtcattgaaatgctgccca
aaaggactgcaagccccatcagttgggaatggtcagaggatgcacagtcttcttttgact
tcatcgcaggatgagattgttgtccatgaatcgcctaatgttggtccagctgcacatgaa
tctaaaggcagtagccagtgggagacacttgagctctatcttgaaaaatacaaaaagttt
catgctaaattgcctgttgttgttgctgatactcttcttgctgctgatcctcaaattgag
ttgcctctttggttggttcaaatgttcaagggtgtgccagcaaaaagtggttggggaatg
gcgggaagtgagtcaaatcctgcttctttgcttcgactatatattgattatggtcgttat
actgaagcgactaatctgcttctcgagtacattgaatcctttgcatcactgagaccagct
gatattattcgtcgtaaaaggccatttgcagtttggttcccatattctttgattgagcgt
ttatggtgtcaacttcaacaatctatcaaattaggccacatggttgatcaaagtgaaaag
ctgaaaaagttgttacagggtgctctagtgaaccatctacatcaacttaaagtggattca
gatgatgtgatgtcttctgcagtctag
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integrated database retrieval system
