Nicotiana tomentosiformis: 104098500
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Entry
104098500 CDS
T05025
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104098500
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104098500
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104098500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-C3HC4
PHD_NSD
zf-ANAPC11
DUF2921
zf-RING_UBOX
zf-RING_16
zf_RING_Vps8
zf-P11
Motif
Other DBs
NCBI-GeneID:
104098500
NCBI-ProteinID:
XP_009603544
LinkDB
All DBs
Position
6:19817286..19827898
Genome browser
AA seq
566 aa
AA seq
DB search
MGVAKNLIFLRKNDGVLLRVLFSLWFIFGGFCPVMCLRPLRERYRSWGDEWLLVRKDENE
LGPFSAWNITGTYRGSWRFLDSTNGSSRFPDFRKSNGNSVLELISNPTKITGVHYVQGAI
IFHDVFDNEHGVDGAQIRVEGVYIWPFRQLRMVAYSGKDGEFGQEDDYLLSNPYHLLGVF
SSQIFQESSRDKIWKKKHSPFYEMEKHCNIEIAAQIARVSSSTNDGARDHYHLEGLIESP
SVDADGDCFSPMLLNATSVNIEVYYNKAVNYTLVVTFISFLQVLLLIRQMEHSNTQSGAA
KVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKA
NRPMNSGEGWEAMRRELSVLYSRFYGILLGGILVMYEFHKLLRPILLLLHSFWIPQIVTN
VIRDSRKSLHPHYILGMSITRLAIPLYVFGCPHNFMRIEPDKNWCICLGVFMSLQAAILL
LQHYLGSRWFIPRQILPEKYNYNRRFDQGANSAADCVICMAAIDLSQRSNNCMVTPCDHF
FHSGCLQRWMDIKMECPTCRRPLPPA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggctaaaaatttgatctttttgaggaaaaatgatggggttttgcttagagtt
ttattcagtttatggttcatctttggtgggttttgtccagtaatgtgcctcaggcctctc
agggaaagatatcgatcgtggggcgatgagtggcttcttgtgagaaaggatgaaaatgaa
ttggggccattttctgcttggaatataacaggaacttatagagggtcttggagattccta
gattcaacaaatggctcttccaggtttcctgattttaggaagtccaatggcaactcggtc
cttgagttgataagtaatccaacaaaaataactggtgtacattatgttcagggtgcaata
attttccatgatgtttttgacaatgaacatggagttgatggtgcacaaatcagagtagaa
ggtgtatatatatggccattcagacaacttcgaatggtagcttacagtggcaaagatggt
gagtttgggcaggaagatgattatctattgtcaaatccgtatcacttgcttggagttttc
tcatcccagatcttccaggagtcttctcgagataagatttggaaaaagaaacactcaccg
ttttatgagatggagaaacattgtaatattgaaattgctgcacaaattgctcgtgtctca
tcctccacaaatgatggtgctcgcgatcactatcacctagaaggattgatagagagcccg
tcagtggatgccgacggagactgtttctcaccaatgctattgaatgctacctctgtcaat
atagaggtttactacaacaaagcagtgaactacacattggtggtcacatttatatctttt
ctgcaagtgctccttttgattcgacaaatggaacatagcaacacacaatcaggagctgcc
aaagtttcaattctgatgattggacaacaggctatcatggatgcttatctttgtcttttg
catctgaccgcaggaatacttgttgaatcccttttcaatgcttttgcaactgctgcattc
ttcaagtttgttgtcttctcgatatttgagatgagatatcttcttgctatatggaaagca
aataggccaatgaatagtggagagggttgggaagcaatgaggcgtgaactctcagtactt
tacagccgtttctatgggatccttttaggtggtatattggtcatgtacgagtttcacaag
cttctacgccctattcttctccttttacactctttttggatacctcaaattgtaactaat
gtcattcgtgactcaagaaaatcattgcaccctcattacatcttgggaatgagtataact
cgtctggcaatcccattatatgtctttggctgtcctcacaatttcatgcgtatagagcct
gacaagaattggtgcatttgcttgggagtttttatgtcgttgcaggcggcaattcttctt
ctgcagcactatcttggatctcgttggttcattccacgtcagattttacccgagaagtat
aattataacagaaggtttgatcagggtgccaatagtgccgctgattgtgttatttgtatg
gctgctattgatctttctcaacgttcaaataattgcatggtgacaccttgtgatcatttc
tttcattccggttgtttgcaaagatggatggacataaagatggagtgtccaacatgtcga
cgtcctcttccaccagcctga
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