Nicotiana tomentosiformis: 104098775
Help
Entry
104098775 CDS
T05025
Name
(RefSeq) prolycopene isomerase, chloroplastic isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00906
Carotenoid biosynthesis
nto01100
Metabolic pathways
nto01110
Biosynthesis of secondary metabolites
Module
nto_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
104098775
Enzymes [BR:
nto01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
104098775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GDI
FAD_oxidored
HI0933_like
GIDA
Thi4
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
104098775
NCBI-ProteinID:
XP_009603890
LinkDB
All DBs
Position
2:complement(13581104..13587874)
Genome browser
AA seq
613 aa
AA seq
DB search
MGTLNFMFPNSLLDGNCKIVALGGSKLRNSKKISSCFDPLRIGNCTDVQQLHGLNLGLNK
TKGRKWGIVSQLKAVVDKGVESYGSSDVEIDESCCYDAIVIGSGIGGLVAATQLAVKGAK
VLVLEKYVIPGGSSGFYQRDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCKLEVIPDP
TTVHFHLPNDLSVRVHREYDDFIQELVSKFPHEKEGIIKFYSECWKIFNSLNSLELKSLE
EPIYLFGQFFKKPLECLTLAYYLPQNAGDIARKYIKDPGLLAFIDAECFIVSTVNALQTP
MINASMVLCDRHFGGINYPVGGVGEIAKSLAKGLVNQGSQILYRANVTSIILDNGKAVGV
KLSNGRKFYAKTIVSNATRWDTFGKLLKAENLPKEEEAFQKAYVKAPSFLSIHLGVKADV
LPPDTDCHHFTLEDNWTNLEKPYGSIFLSIPTVLDSSLAPEGHHILHIFTTSSIEDWEGL
SLKDYEAKKELVAERIISRLEKTLFPGLKSSIVFKEVGTPKTHRRYLARDSGTYGPMPRG
TPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADLGFEKKSEVLDS
GLLRLLGWLRTLA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccttgaattttatgtttcccaattcacttcttgatggtaactgcaagattgta
gccttgggtggtagcaaactcagaaacagtaaaaagataagttcttgttttgaccctttg
agaattgggaattgtactgatgtccagcagcttcatggcttgaatttggggctgaataag
actaagggaaggaaatggggtattgtttcacagttgaaagcagttgtagataaaggagtg
gagagctatggaagtagtgatgtagaaatagatgagagttgctgctatgatgccattgta
atagggtcaggaataggcggattagtggcagcaacacagctagcagttaagggagctaag
gttttagttttggagaagtatgttattcctggtggaagctctgggttttaccagagggat
ggttatacttttgatgttggttcttcagtcatgtttggattcagtgataagggaaacctc
aatttgataactcaagcattggcagcagtaggatgtaaattagaagttatacctgaccca
acaactgtgcatttccacctacccaatgacctttctgtccgtgtacaccgagaatatgat
gacttcattcaagagcttgtgagtaaatttccacatgaaaaagaagggattatcaaattc
tacagtgaatgctggaagatctttaattctctgaattctttggaactgaagtctttggag
gaacccatctacctttttggccagttttttaagaagcccctcgaatgcttgactctcgcc
tactatttgccccagaatgctggtgacattgctcggaagtatataaaagatcccgggttg
ctggccttcatagatgcagagtgttttattgtgagcacagttaatgcattacaaacacca
atgatcaatgcaagcatggttctatgtgacagacattttggaggaatcaactatcccgtg
ggtggagttggcgagattgccaaatccttagcaaaaggcttggttaatcagggaagtcag
atactttatagggcaaatgtcacaagtatcattttggacaacggcaaagctgtgggagtg
aagctttccaatggaaggaagttttacgctaaaaccatagtatcaaatgccaccagatgg
gatacttttggaaagcttttaaaagccgagaatctgccaaaagaagaagaagctttccag
aaagcttatgtaaaagcaccttcctttctttctattcacttgggcgttaaagcagatgtt
cttccgccagacactgattgccaccattttacccttgaggataattggacaaatttggag
aaaccatatggaagtatattcttgagcattcctacagttcttgattcatcattggcccca
gaaggacaccatattcttcacatttttacaacgtcaagcatagaagattgggagggactc
tctctgaaagactatgaagcaaagaaagagcttgttgctgaaagaattataagcagactt
gaaaagacactcttcccagggctcaagtcatctatcgtctttaaagaggtgggaacacca
aagacacatagacgataccttgctcgtgatagtggtacctatggaccaatgccacgcgga
actccaaagggattacttggaatgcctttcaataccactgctatagatggtctatattgt
gttggcgatagttgctttcctggacaaggtgttatagctgttgccttttcaggagtaatg
tgtgctcaccgagttgctgctgacttaggatttgagaaaaaatcagaggtgctggacagt
ggtcttcttagactactcggttggttaaggacactagcataa
DBGET
integrated database retrieval system
