Nicotiana tomentosiformis: 104099380
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Entry
104099380 CDS
T05025
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X2
Organism
nto
Nicotiana tomentosiformis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
CMS1
AAA_30
YgbB
ERCC3_RAD25_C
AAA_19
zf-CCHC_4
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104099380
NCBI-ProteinID:
XP_009604645
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Position
3:complement(42948914..42957548)
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AA seq
738 aa
AA seq
DB search
MACSSSIIGVPSIYQTNPSRRPIPTPLLSLPYSNEKSHFINVRLRHASLVASAVVTPNSS
VLSEEAFKGIGGFGKDSLNVSSEPEYDSEFDDDSGAEDELAISKLGLPQRLADSLEKRGI
THLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPVLKKLSGDEEIRNTLRRGRLPKI
LVLAPTRELAKQVEKEMKESAPYLNTVCIYGGVSYATQQNALTRGVDVVVGTPGRLIDLI
NNNTLKLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQSMLFSATMPGWVKKLARK
YLNNPLTIDLVGDQEEKLAEGIKLYALSTTATSKRTILSDLVTVYAKGGKTIVFTQTKRD
ADEVSMALSNSISSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVI
HYELPNDPETFVHRSGRTGRAGKEGNAILMYTGNQRRTVRSLERDVGCKFEFVSPPSVKE
VLESSAEHVVATLNGVHPESVEYFTPTAQQLMEQQGVNALAAALALLGGFSKPPSSRSLI
THEQGWTTLQLTRDSVNSKGFLSARSVTGFLADVYSPAADEVGKIHLIADERVQGAVFDL
PEEIAADLLNQELPPGNTISKITKLPALQDDGPASDFYGKFSSNSRGARGGLRDRRGRNS
RGLSSGRFSDNDDDNWGNDFRPRGGRTRRGGSDWLIGGDRRTSRSSSGGSRDRSFGGACF
SCGRSGHRASECPNKRDY
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcctgttcttcttccattataggagttccctccatataccaaaccaacccttcacga
agacccatccctaccccacttctatcccttccttactctaatgaaaaatcccattttatt
aatgttcgtctcagacatgcttctcttgtggcttctgctgtggtaactccaaattcttct
gttcttagtgaagaagcgttcaagggaattgggggttttgggaaggactctttgaatgtt
agcagcgaacctgaatacgattctgagtttgatgatgactcaggagctgaggatgaactt
gctatttctaaactgggtttacctcagagacttgctgactctcttgagaaacgtggaatt
actcatcttttccctattcagagagctgttctagtgccggcactggaaggccgggatata
attgctcgtgcaaagacaggaacagggaagacacttgcctttggtattccagtattgaaa
aagcttagtggagatgaagaaataagaaatactctgagacgtgggcggcttcccaaaatt
ctggtacttgcacctactcgagagttagccaagcaagtagagaaggaaatgaaagagtcg
gcaccatacttgaacactgtctgcatatacggaggtgtttcttatgctacacagcaaaat
gcactgacccgtggggttgatgttgttgttggaactccaggtagacttattgacctaata
aacaataacaccttgaaactgggggaggtggaatatttggtcctcgacgaggctgatcaa
atgctcgcagttggatttgaggaagatgtggaagttattttggaaaaacttccatcacag
aggcagagcatgcttttctcggccaccatgcctggctgggtaaagaaactggctaggaag
tatttgaacaatcctttgacaattgacttggttggtgatcaagaggaaaagctggcagag
gggatcaagctttatgctctatcaactacagcaacatcaaaacgaaccatactcagtgat
cttgttacggtttatgcaaagggtggaaagacaattgttttcacacagacaaagcgagat
gctgacgaggtctcaatggcattatcaaacagcatttcttctgaggcactgcatggcgac
atttctcaacatcagagggaaagaactctaaatggctttaggcaaggaaaattcaccgtg
ctagttgcgactgacgttgcatctcgtggtcttgatataccgaatgttgacttagtaatc
cattatgaactgcccaatgatccagagacttttgttcatcgctctggtcgaacaggacgt
gctggaaaagaaggcaatgctattctgatgtacacaggtaatcaaaggcgaactgtcaga
tctctcgaacgtgatgttgggtgcaaatttgagttcgttagtcctccatctgttaaagag
gttttggagtcatcagctgagcatgtggtggctacacttaatggagttcatcccgaatct
gttgagtacttcactccaactgcgcaacagttgatggagcaacaaggagtaaatgccctt
gctgctgcacttgcacttttgggtgggttttccaaaccgccatcttctcggtctctaata
actcatgagcaggggtggacaacattgcagctgacacgtgattctgtaaattccaaagga
ttcctgtcggcaagatcggttaccggtttcctcgctgatgtttattcaccagctgccgat
gaagttggcaaaattcacctaattgcagatgaaagggttcagggggctgtatttgatctt
cctgaggagattgcagcagatctactaaatcaggagttaccacctggaaatactatttcc
aaaattactaagttacctgctttacaagatgatgggccagctagtgatttttatgggaag
ttttcaagcaatagtaggggggcacgaggaggtttaagggaccgtagaggcagaaattcc
cggggtttgtctagtggtcgattctctgacaatgatgatgataattgggggaatgacttt
aggccgcgaggtggccgaacaagaagaggaggaagtgattggctcattggtggtgatagg
cgcactagcaggtcttcatcgggaggaagcagagacagaagctttggtggtgcatgtttc
agttgtggacgcagtggtcaccgagcatctgaatgccctaacaaaagggactattag
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