Nicotiana tomentosiformis: 104099396
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Entry
104099396 CDS
T05025
Name
(RefSeq) KH domain-containing protein At4g18375-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104099396
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
104099396
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
104099396
NCBI-ProteinID:
XP_009604665
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Position
12:27691419..27700740
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AA seq
621 aa
AA seq
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MGETGKRSRRDDGDSKNQKRRTERDEKGDDELVVYRILCPDNVIGSVIGKSGKVINSIRA
ETKAKVKVVDPFPGAKDRVITIYCYVKEKEDVEVDEEFNEKKPLCSAQDALLRVYTAIAN
ALAAVGDSDKKRKEKEECQLLVPSSQSANIIGKSGTTIKKLRSKMRANIKVIAKDASDPT
HSCALEFDNFVLITGDSESVKRSLFAVSAIMYKFTPKEDIPLNTNVPEVRPSIIIPSDVP
IYPAAGIYQNVDPIIPSRSVPSVLGTTHIPELPGYVDAGSTWPVYSSALPMVSGYGGGAS
QTEELTIRVLCPTNNIGRVIGKGGASIKSVRQASGARIEVGDAKADRDQCIITVISTESV
DDLKSMAVEAVLLLQGKINDEDEDSVTFRLLVPSKIIGCIIGKGGSIVNEIRKRTRADVR
ISKGQKPKCADSNDELVEVAGEISSVRDALIQIVLRLRDDVLKGREGNFNPSAGVDSLRT
GGTGHSLASVLPNVPPTASLSYEQRVESGNGIGMRSSGSLYGHESFSRGDDGYGAYSSYS
SKIYGGPPPPTALEMVIPGHAVGKVIGKGGSNIDNIRKISGAAVDIIDSKSSRGDQIAII
SGTQEQKRAAENLIQAFIMAT
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagactggaaaacgatcgcgtagggatgacggggatagcaagaaccagaagagg
aggacagagagagatgagaaaggcgatgatgaactagtggtgtacagaattctatgccca
gataatgtgattggtagtgttattggaaagagtgggaaagtcataaattcgattagagcc
gagaccaaggcgaaggtcaaggtggtggacccatttccaggtgctaaggatagagttata
accatttattgctatgtaaaagaaaaggaagatgttgaggttgacgaggagttcaatgag
aaaaaacctctttgctctgctcaggatgctcttctaagggtttatacggcaattgcaaat
gccttggcagctgttggagattctgataagaagcgcaaggaaaaagaggagtgtcagctt
cttgttccatcgagccagtctgcaaatatcattggtaaatctggtaccaccataaagaag
ttgagaagcaagatgagggctaatattaaagttattgctaaagatgctagcgatccaaca
cattcctgtgctctcgagtttgataactttgttctgataactggtgactcagaatcagta
aagagatcgctctttgctgtttctgcaatcatgtacaagttcacacctaaggaagatatt
cctcttaatactaatgttcctgaagttcgtccaagcattattattccttcagatgttccc
atatatccagcagctgggatttatcaaaatgtggatcctattatcccatctagatctgtt
ccatctgttttaggcaccacacacataccagagcttccaggttatgtagatgcaggaagc
acatggccggtttattcttctgctcttcccatggtttctggttacggtggtggtgcctct
caaactgaggaattgactattagagtgttgtgtccaactaacaatattgggcgtgttatt
ggaaaaggaggagcttctattaaaagtgtacggcaagcaagtggtgctcgtattgaggtt
ggtgatgccaaagccgatcgtgatcagtgcatcatcacagtcatttccactgagtcagtg
gatgatcttaaatccatggcagttgaagctgtcttgctgctgcaagggaaaataaatgat
gaagatgaggatagtgtaacttttcgtctacttgttccatcaaagatcattggatgtatc
attgggaaaggtggttcaatcgttaatgaaatccggaagagaactagagctgatgtacgt
atctcgaaaggccagaagcccaaatgtgcagattcaaatgatgaacttgttgaggtggct
ggggaaattagtagtgtgagggatgcccttatccagattgtactgaggctcagagatgat
gttctgaaaggccgagaaggtaattttaatccatctgccggtgttgattctttacgcact
ggtggtactggtcattcactggcttcagttttgcccaatgttcctccaactgcttctttg
agctatgaacagagggttgagtctgggaatggcattggaatgcgttcttcgggaagcctc
tatggtcatgagtcattctcgaggggggatgatggctatggagcgtactcttcatattcc
tcaaagatatatggcggaccgcctccgcccacagctctagagatggttatccctggacat
gcagttggtaaagttattggtaaaggtggctcaaacatagataatattcgcaagatatcc
ggagcagctgtggacataattgattccaaatcctctcgaggtgatcaaattgctataata
tctggtacacaggaacagaagcgtgctgcagaaaacttgattcaggcattcataatggcc
acttga
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