KEGG   Nicotiana tomentosiformis: 104099803
Entry
104099803         CDS       T05025                                 
Name
(RefSeq) uncharacterized protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nto03009]
    104099803
   04121 Ubiquitin system [BR:nto04121]
    104099803
Ribosome biogenesis [BR:nto03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    104099803
Ubiquitin system [BR:nto04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104099803
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Sof1 Beta-prop_EML_2 EIF3I WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_DCAF4 Beta-prop_RIG_2nd WD40_RFWD3 ANAPC4_WD40 eIF2A WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_Vps41 VID27
Other DBs
NCBI-GeneID: 104099803
NCBI-ProteinID: XP_009605203
LinkDB
Position
7:complement(25539127..25546940)
AA seq 452 aa
MRVKVISRSTDEFTRERSQDLQRVFRNFDPNLRPQEKAVEYVRALNAAKLEKIFARPFVG
AMDGHIDAVSCMAKNPNHLKGVFSGSMDGDVRLWDLATRRTVRQFPGHQGAVRGLTVSTD
GGILVTCGTDCTLRLWKVPGDTLMESDDGSGNSSQPLAVYVWKNAFWGVDHQWDGDLFAT
AGAQVDIWNHNRSQPVNSFEWGNDTVTSVRFNPGEPNLLATSASDRSINIYDLRMSTPAR
KVIMRTKTNSIAWNPMEPMNFTAANDDGKCYSYDVRKLNEAKCVHKDHVSSVMDIDYSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSCDASYIISGSDDTNLRLWK
AKASEQLGVVLPRERKKHEYLEAVKNRYKHLAEVKRIVRHRHLPKPIYKATKQIREMTES
ERRRAERRKAHSAPGSIQNEPLRTSRIIKEIE
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgcgggtgaaagtgatatctcggtctacagatgaatttactcgtgaacgcagtcaggac
ctccagagagtttttcgtaacttcgatcccaaccttcgacctcaagagaaggcagtggaa
tatgttcgtgccctgaatgcagcaaaactagagaagatatttgcgaggccatttgttgga
gcgatggatgggcacattgatgctgtctcttgcatggcaaagaatcctaatcacttgaaa
ggagtattttctggctctatggatggtgatgttcgtctatgggatttggctaccaggcgg
acagtacgtcagtttcctggtcaccaaggtgcagtacgtggtttgacagtgtctacggat
ggcggtattcttgtaacatgtggaactgattgcactcttaggctctggaaagttcctggt
gatacactaatggagtcagatgatgggtctggtaactcatcccagccattggctgtgtat
gtttggaagaatgcattctggggtgttgaccaccaatgggatggtgatctttttgctact
gctggtgctcaagttgacatttggaaccataacaggtctcagccggttaatagttttgaa
tgggggaatgacacagttacatctgttcggtttaatccaggagaacctaatcttttggca
acatcagcaagtgatcgtagcataaatatatatgatttacggatgtctacaccagctaga
aaggttattatgaggacaaaaactaattctatagcttggaatcccatggagccaatgaat
ttcactgccgctaatgacgatggcaaatgctacagttatgatgttagaaagttaaatgaa
gccaaatgtgtgcataaagatcatgtctcctcagtgatggatatagactattcaccaacc
ggtcgagaatttgttacaggatcttatgatagaacagtgagaatttttcaatataatggt
ggtcacagcagggaaatctatcacactaagaggatgcagagggtattctgtgtcaagttc
agttgcgatgcaagttatattatctcaggaagtgatgataccaaccttcgtctatggaaa
gcaaaagcatctgagcaattgggagttgttttgccaagagagcggaaaaaacatgaatat
ttggaggccgtcaagaatcgttacaagcatcttgctgaagtcaagcgcattgtcagacat
aggcacttgccaaaaccaatatacaaggcaacaaagcaaatacgggagatgactgaatct
gagaggcggagagcggagaggaggaaagctcacagtgccccaggaagcattcagaacgag
ccattgcgaacgagtagaattattaaagaaattgagtga

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