Nicotiana tomentosiformis: 104099928
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Entry
104099928 CDS
T05025
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Module
nto_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104099928
Enzymes [BR:
nto01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104099928
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104099928
NCBI-ProteinID:
XP_009605359
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Position
6:complement(42336453..42351096)
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AA seq
392 aa
AA seq
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MANFRTFLLALVFFSFISLFLPSCLAYNVVSYGARGDGGTDSTTAFLRAWSAACSSISPA
NVYVPRGTFLIRTVTFTGPCRSRIEFRVDGTLVAPADYNAIGHSGFWILFYKVSRLSVYG
GSIDAQGSAFWSCRKAGRSCPQGAKSISFFWCDDVLVSGLTSVNSQTKHVGIDYSSRVRV
ENLKIRAPSRSPNTDGIHIENSRGVTIKGSTIKTGDDCISIGPGSINLWIEEIGCGPGHG
ISIGSLGSSNNEAGVVNITVTNSVFTKTQNGVRVKSWARPSGTYAKNLMFRNLIMRNVGY
PIIIDQNYCPDNSCPHQNSGVKVSQVTYKNVKGTSSTQVAMKFDCSYTNPCTGIKLQDIK
LTHIDRLRRPAILYCRNARGRHSGTVIPKGCF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggccaactttagaacatttcttttggccctagtcttcttttctttcatatccttattt
ctgccttcttgcttagcctacaatgtggtgagttatggagctaggggcgacgggggaacg
gactcgaccacagcgtttcttcgtgcctggtcggccgcatgcagctccattagcccagct
aatgtttatgttcctcgtggaacatttttgataagaacagtgaccttcaccggcccttgc
cggagcagaattgagttccgagtagatggaactcttgttgctccggcagattataacgcc
attggccattctggcttctggattttgttttataaagttagtaggctttctgtttatggt
ggatccattgacgcccaaggaagtgctttttggtcgtgtcgtaaagctggccgttcctgc
ccccagggagcaaagtcaatatcattcttttggtgcgatgatgtactggtaagtggatta
acatcagtgaatagtcaaacaaagcatgtgggtattgattatagcagccgtgttagagtt
gagaatttgaaaataagagctccaagtagaagcccaaacactgatggaattcatatagag
aattcaagaggagttacgattaaaggcagcacaatcaaaactggagatgactgtatttcc
attggccctggctccatcaacttgtggatcgaagaaattggatgtggccctggacacggc
atcagcatcggaagtttgggaagcagtaataatgaagctggagttgtgaatataacagta
accaattcggttttcacaaagacacagaatggtgttagagtaaagtcatgggcaagacca
agtggtacctatgctaaaaatctcatgttcagaaatcttataatgaggaatgttgggtac
cccataatcattgaccaaaactattgccctgataatagttgccctcatcagaattcagga
gtaaaggtgagtcaagtaacatacaagaatgtgaaaggaacatcgtccacacaagtagcc
atgaaatttgattgcagttacacaaatccatgcaccggaatcaaactgcaagacataaag
cttactcacattgatcgcctaagaagaccagcaatattgtactgtagaaatgcaagggga
agacatagcggcacagtcattcccaagggttgcttctga
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