Nicotiana tomentosiformis: 104100067
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Entry
104100067 CDS
T05025
Name
(RefSeq) protein argonaute 5-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104100067
03036 Chromosome and associated proteins [BR:
nto03036
]
104100067
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104100067
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104100067
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
104100067
microRNA pathway
RISC loading complex
104100067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoL1
PAZ
ArgoMid
ArgoL2
Piwi_N
DUF2344
Motif
Other DBs
NCBI-GeneID:
104100067
NCBI-ProteinID:
XP_070038160
LinkDB
All DBs
Position
8:complement(10209803..10220503)
Genome browser
AA seq
934 aa
AA seq
DB search
MKVEIENYNSFYELTLVFSPKRRFRRFRRLFLTMFSKEGPSYAHVLVQGKKSSASKTDQS
PSKAVQSPVKTDKTPVQTDKAPIKTDESPSKLPRRPGYGRSGVPCKVRANLLCTQLQKEV
KMYFYEVKFSPEIWSKKWSTKVILQLYVDSKHLLNQHKLAYDGKSCVYTSKRLPFESEDF
DVKLTGTNGGKEWLMEYKVSFKFIREVDITSLNQFIEKSRTDYPQEAIKALNVVLQTPPL
ATYELVGDSFFDRSLGDPRSLTEGLELWVGYFQSLRPRQMGLSLNINSLARPFYQTIDVY
EFVAKNLEVRDLSGYIMSDKDRIKAICLLKDLMVEMLHEGRVVRYKVYALSDQPAVELMV
SHDPEGEISLFDRYSKLYPTQMKYPNLPAIQIRKSTPEYIPMELFKIAPGQRYRSTLNAK
QVSGMRKANCQKPADKEKIIKKVVKSNIYDAENMPSQKDNADETMIDKMMLMMNEFGISV
QNGLTTIDAHVLSTPQLTYNLESGKQIQVLPEDGHWNMIDKKMIDGGSVTSWTCVSFSRT
KLSSQPEEFCKSLIRMCRCLGMKFNKDPLVPIRSADAGQIEETLVGIVEESGKTPLQLLI
VILPKDSGYYGEIKTICETRLGLVSQCCQSKKAFSKDTEFIERYLEYLALKINVKVGGRN
FVLQHAILALTAVPTIVFGSDVSHPSPGDVCSPSIAAVVASMDWPELTKYRSVVSAQSSR
QEIIMDLYKEDTNDGKTVGAGMIRELLLAFKESTGICPQRIIFYRDGVGESQFSEVLEKE
VAAIRMACKSLGETYKPRLTFVVVQKRHQTRLFPADDKLIPKSGNILPGTVVDTKICHPM
EFDFYLCSHGSMEGTSHPAHYHVLCDDNGFDAETIQDLTYNLCYRDARCTSSLAIVAPAY
YAHLAAGRARYYVDKAGIMSLPKIKKQSEIMYYC
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgaaattgaaaactacaattcattctatgagttgacattggtcttctctcct
aagaggcgtttccggcgtttcagaaggcttttccttacaatgttttcgaaggaggggccg
tcttatgcgcatgtacttgtccaagggaagaaaagctcggcgtcaaaaactgatcagtcg
ccgtcaaaagcagttcagtcgcctgtaaaaactgataagacgcctgtacaaactgataag
gcgcctataaaaactgatgagtcgccgtcaaagcttccgaggagaccagggtacggtaga
agtggagttccttgtaaagtgagagctaatcttctttgcactcagctgcaaaaggaggtt
aaaatgtatttctacgaagtgaaattctctcccgagatttggtcaaagaaatggtcaaca
aaagttatactccagctctatgtggactctaagcatctcttgaatcaacacaaattagca
tatgatggtaaaagctgtgtttacacttctaagcggcttccatttgagtctgaagacttt
gatgtcaagcttactggaactaatggtggaaaagagtggttaatggaatacaaagtctct
ttcaagtttattagagaagttgatataaccagtttgaatcagttcatagaaaagtcaaga
acggactatccacaagaagctataaaagctctgaatgtggtgcttcaaacaccaccatta
gccacatacgaattagtgggagattcatttttcgatagatcgttgggagatcctcgttcc
ctaactgaaggtttagaattgtgggttggctattttcagagccttcggccaagacagatg
gggctgtctttgaatattaatagtttagccagaccattctaccagacaatagatgtatat
gaatttgttgcaaagaaccttgaagtcagggatcttagtgggtacattatgtctgataag
gaccgtatcaaggccatatgccttttgaaagatcttatggtggagatgcttcacgagggt
cgtgtcgttcgctacaaagtctatgcattgtcggatcaaccagcggtagagttaatggtc
tcccatgatcccgaaggggagatatctcttttcgatcgctacagtaaactctacccgact
caaatgaaatacccaaatttgcctgctattcagattcgaaagagtactcctgaatatatt
cccatggagttattcaaaattgctccgggacaaagatatagaagtacactaaatgccaag
caagtctcagggatgcgaaaagcaaattgtcaaaaaccagctgataaagagaaaattatt
aagaaggttgtgaagtctaatatctatgatgctgagaacatgccttcccaaaaagataat
gctgatgaaacgatgattgacaagatgatgttgatgatgaacgaattcggtatttcggtt
cagaatggcctcaccaccattgatgcacatgttctttcgactccacagctgacgtataat
cttgaatcagggaaacaaatacaagtgctgcctgaggatggtcactggaatatgatcgac
aagaaaatgatcgatggtggcagcgtaacatcctggacatgtgtcagcttctcaaggact
aagttatcgtcacagccagaggagttctgcaaatcactgattagaatgtgtcgctgttta
ggaatgaagttcaacaaggatcctttggttcctattcgctcagctgatgctggtcaaata
gaggaaactctggtcggtatcgttgaagagtctgggaagacacctcttcagcttttaatt
gtgattctaccaaaggattcaggatattatggagagatcaaaactatatgtgaaactaga
cttggtcttgtttcccaatgctgtcagtcaaagaaagcattttccaaagatacagagttt
attgagcggtaccttgagtacttagcactgaagataaacgtcaaggtaggtggaagaaac
ttcgtattgcagcacgcaatactggctctcactgctgtcccaactattgtctttggttct
gatgtgtcacatccttcaccaggagatgtttgtagtccatccatagctgcagtggtcgcg
tctatggattggccagagcttactaaatataggagtgtggtttctgcacagagcagtagg
caagagatcattatggacctgtacaaagaagacacaaatgatggaaagactgttggtgct
ggaatgattagggaattgctacttgcttttaaagagtctacagggatatgtcctcaaaga
ataatcttctatagagatggagtgggagaaagtcagttcagtgaggttttggaaaaagaa
gtagctgctattcgcatggcatgtaaatcactcggcgaaacgtataagccccgacttacc
tttgtggtagtacagaaaagacaccagacacgtctttttccggctgatgacaagttgata
cccaagagtggaaacattttgccaggtaccgtagtagataccaagatttgccaccctatg
gagtttgatttttatctgtgcagccatggttccatggagggtactagtcatcccgcgcat
taccacgtcttatgcgatgataatggattcgatgcagaaaccattcaggatttaacatac
aacttgtgttacagggatgcaaggtgcacatcatcgcttgccatcgtggcaccagcttat
tatgcccacttagctgctggtcgtgcacgttattatgttgacaaggcggggatcatgagt
cttcctaagattaaaaagcaaagtgaaataatgtattattgctga
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