KEGG   Nicotiana tomentosiformis: 104100136
Entry
104100136         CDS       T05025                                 
Name
(RefSeq) B-type cell cycle switch protein ccs52B isoform X1
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
nto  Nicotiana tomentosiformis
Pathway
nto04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104100136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nto04121]
    104100136
Ubiquitin system [BR:nto04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     104100136
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_WDR41 Tricorn_2nd WDR90_beta-prop_4th Beta-prop_RIG_1st Beta-prop_HPS5 Beta-prop_SPT8 NBCH_WD40 Aldo_ket_red Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 104100136
NCBI-ProteinID: XP_009605604
LinkDB
Position
5:66056407..66059084
AA seq 488 aa
MERRKSGINLPPTMSETTLRLDAFSSPPSSKLRSRTSNLASPMSNRSPRTISNLSSSPSS
KSATCSDRFIPCRSSSRLHTFGLVEKAEGGGTNNDAYSRLLKSELFGSDFSSPAGASPMS
PSKNMLRFKTENSGPNSPYSPSVLGYDTSLSNEVSTPPKPPRKVPKTPHKVLDAPALQDD
FYLNLVDWSSQNVLAVGLGTCVYLWTASNSRVTKLCDLGPTDSVCSVQWTREGSYISIGT
SLGQVQVWDGTQCKKVRTLGGHQSRTGVLAWSSRILSSGSRDRNILQHDIRVPSDFVSKF
VGHKSEVCGLKWSHDDRELASGGNDNQLLVWNLRSQQPVLKLTEHTAAVKAIAWSPHQCG
LLASGGGTADRCIRFWNTTNGNQLNHVDTGSQVCNLAWSRNVNEIVSTHGYSQNQIMVWK
YPSMSKVATLTGHSLRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSVKAPAAVKDNTGLW
SLGRTHIR
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggaaagaagaaagagtggaattaaccttccaccaacaatgtcggaaaccactcttcgg
cttgacgccttttcttctcctcccagctcaaagcttcgatctagaactagcaacttggca
tccccaatgtccaacaggtcacctcggactatatcaaacctgtcatcatccccatcatcc
aaatctgctacttgcagtgataggttcatcccctgtagatcttcgtcgaggctacatact
tttgggctggtagagaaggcggagggaggaggaaccaacaacgatgcctactccagattg
ttgaaatctgagctttttgggtctgatttttcttctcctgcaggtgcttccccaatgagt
cccagcaagaatatgctgaggttcaagactgaaaattcagggcctaattctccttactcg
ccttccgttttggggtacgacacttccctctctaacgaggtttctacccctcctaaaccc
cctaggaaagtgcccaagacaccccacaaggttctggatgcaccagcacttcaagatgac
ttctacttgaacctagttgattggtcctctcagaatgttcttgctgttgggctaggaaca
tgtgtttatttatggacagcttcaaatagtagagtgacaaagctgtgcgacttaggacct
actgatagtgtctgctcagtccaatggactagagaggggtcttatatatctattggtaca
agtcttgggcaagttcaggtttgggatggcacacaatgcaagaaggttagaaccttgggt
ggacatcagtcaagaacaggagttcttgcatggagttcgcgcatcttatcttctggtagc
agagacagaaacatccttcagcatgacattcgcgttcctagtgactttgtgagcaagttt
gtcggtcacaagtctgaggtatgtggactaaaatggtctcatgatgatagagagctcgcg
tcagggggcaatgacaatcagctcttagtgtggaatctgcggtcccagcaaccagttttg
aagctaacagagcacactgcagctgtcaaggccattgcctggtctcctcaccaatgtggc
cttctggcatcaggaggaggaactgctgatcgctgcattcgcttttggaacacaacaaat
ggcaatcagttgaaccatgtggacacaggaagccaggtatgcaatctagcctggagtaga
aatgtgaatgagatagttagcacacatgggtattcccaaaaccaaatcatggtgtggaag
tatccatcaatgtcaaaggtagccactctaactggccatagcctgcgcgtcctgtatctt
gccatgtcacctgatggccagacaatagtaactggagcaggagatgagacattgcgcttt
tggaatgtatttccctcagtaaaagctcctgcagcagtgaaggacaacacgggactttgg
tctttaggcaggacgcacatacggtga

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