Nicotiana tomentosiformis: 104100181
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Entry
104100181 CDS
T05025
Name
(RefSeq) nuclear cap-binding protein subunit 2-like isoform X1
KO
K12883
nuclear cap-binding protein subunit 2
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
nto03015
mRNA surveillance pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104100181
09122 Translation
03013 Nucleocytoplasmic transport
104100181
03015 mRNA surveillance pathway
104100181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104100181
03041 Spliceosome [BR:
nto03041
]
104100181
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
104100181
Spliceosome [BR:
nto03041
]
Common components
Common spliceosomal components
Cap binding complex
104100181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
104100181
NCBI-ProteinID:
XP_070052799
LinkDB
All DBs
Position
3:complement(8399602..8409822)
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AA seq
254 aa
AA seq
DB search
MASLFKDLAKISAYRDRRFPGTQEEFEDALLKSTTVYVGNMSFYTTEEQVYELFSRAGEI
KKIVMGLDKNSKTPCGFCFVMFYSRDDTEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGAYPPVMPPPHYGRH
GGNHGHGGSYRQGRDYHRKRHREDDHHRSDYPKRTYDRESRRTSDHESRPEKNPRFRESG
DSDEEEDDDRKRRT
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctgttcaaggatttagccaagatttcagcatatagggatagaaggtttccg
ggaacacaggaagaatttgaagatgctttgctgaagtcgacaactgtttatgtggggaac
atgtccttctacacaacagaggaacaagtgtatgagctgttctctcgtgctggagagatt
aaaaagatagtgatgggattggataagaattccaaaactccttgtgggttctgctttgta
atgttctactctagggacgacactgaagattctgtcaaatatatcagtgggacaattctt
gatgatcgccctattcgtgtggattttgattggggatttcaagaaggtagacaatggggc
cgcggtaggagtggtggacaggtgcgcgacgaatatcgtactgactacgatccaggtcga
ggtggttatggaaaattggtccaaaaggaattggaagcacaaagacagctagtggattat
ggcacaggatcattgggcgcttacccaccagttatgccgccacctcactatggtagacat
ggtggaaatcatggtcatggcggttcttatcggcagggtagagactatcatcgcaagcga
cacagggaagatgaccaccatcggtctgattatccaaagaggacttatgaccgtgaatct
cggagaacctctgatcatgaatccagaccggagaagaatccccgtttccgtgagagtggt
gattctgatgaagaggaagatgatgataggaagcggcgtacttag
DBGET
integrated database retrieval system
