KEGG   Nicotiana tomentosiformis: 104100209
Entry
104100209         CDS       T05025                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104100209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nto03021]
    104100209
Enzymes [BR:nto01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     104100209
Transcription machinery [BR:nto03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     104100209
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF688
Other DBs
NCBI-GeneID: 104100209
NCBI-ProteinID: XP_009605686
LinkDB
Position
8:63237431..63250301
AA seq 1220 aa
MTTSDIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDDDDDNLDVGPI
KELGEGFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPS
KRGDGDWKHASVKFGKVSLERPRFWAGEKFSVDGGKEYLDLWPRHARLQNMTYSARIMVE
THVQVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDC
EFDHGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLE
HIKGVEKALTVYFSVAEMPIWILFFALGVSSDREVVDLIDVDIEDTNIVNILVASIHDAD
KKCEDFRKGKKALAYVDRLIKGCRFPPQESVEECIKQYLFPNLSGLKQKARFLGYMVKSL
LHAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPI
EHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTY
TGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPLLETLYRCGMQK
LVDDSAISLHGKQKVLLNGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQGEVR
IFSDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYL
LKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNP
NIRVDTNTHQLYYPQRPLFRTMLSDSLGKPKYARCQKGMLPRPEYYNGQCAIVAVNVHLG
YNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIGRVD
SLDDDGFPFIGANLQSGDIIIGKHAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVV
SLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQL
LEAALGKGIALGGGQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMVQNLIF
MGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN
LHERLFTLSDSSQMHICGKCKNMANVIQRSVQGGKVRGPYCRFCESVEDIVKVNVPYGAK
LLCQELFSMGISLKFDTEVC
NT seq 3663 nt   +upstreamnt  +downstreamnt
atgacgacttctgatatcatggatgaagtgggatgtagtagtggtaaagggaagatatca
aatggatcagcgatgatggattttgatattgatgatctctttgaagtggatgatgatgat
tgggatgaggatgaggatgacgatgacgatgacgatgataatcttgatgtgggtccaatc
aaagagttgggtgaaggtttcttgaagaacttttgtaaaaaggcatcaactggttttttt
gagaagtatggcttgattagtcatcagattaattcctataatgacttcatcaactatgga
atccaaagagtgtttgactcggttggggagatccatgttgagccagggtatgatccatca
aagagaggtgatggtgattggaagcatgcttctgtgaagtttgggaaagtatcccttgag
cggccaaggttttgggcaggggaaaaattttctgtggacggtgggaaagagtacctggac
ttgtggccacggcatgctcgccttcagaacatgacctactctgccaggattatggttgag
actcatgttcaggtgtatactaaaaagctagttagaagcgacaagttcaaaactggggta
gaccagtttgttgacaaggagtgtgagatggaagacaaaagggatgtcttgattgggaga
atccctgtgatggtgaactcagagttgtgctggatgaatggtgttgacaagcctgattgt
gaatttgatcatgggggatatttcatagtcaaaggggctgaaaagaccttcatcgcacag
gagcagatctgtttaaaaagactctgggtgtcaaacagtcccacttggacggttgcatat
cgcccagttgcaaaaaggaatagagtctatattaaactggctgagaccttgaagctcgag
cacattaagggagtagaaaaggcccttactgtgtacttctcagtggcggaaatgccaatt
tggattttgttttttgctcttggtgtatcctctgacagggaggtagtggatttaattgat
gtggatattgaagatactaatattgtcaatatactagtagcttcaatccacgatgctgat
aagaagtgtgaggatttcaggaaggggaaaaaggctctcgcttatgtcgatagacttata
aagggttgtagatttccacctcaagagtctgttgaggagtgcataaaacaatacctgttc
cctaatcttagtggtctcaagcagaaggctcgcttccttggctatatggtaaagtccctc
ttacacgcttttattggtcgcagaaaggttgacaacagagatgattttcggaacaagaga
ttggagctggctggtgagctccttgaacgagagctcagggcgcacattaaacatgctgag
aggcgtatgctgaaggcgatgcaaagagatctttacggagatcgacaagtgcaaccaatt
gagcactatcttgatgcatctattattacaaatggtctctccagggccttttccactgga
cactggtgtcacccttacaagagaatggagagagtctctggtgtagtagcaactattaga
cgaaccaatcctttgcaaatgactgctgatatgaggaaaacacgtcagcaggttacatac
actgggaaggttggcgatgctagatacccacatccttcacactggggaaaggtatgtttt
ctctccaccccagatggagaaaattgtggcctggtgaaaaacttggcaagtatgggtctt
gtcagcacaacgattttgaagccacttcttgagacgttgtaccggtgtgggatgcaaaag
ttagtagatgatagtgccatctcactccatggaaagcaaaaggtacttttaaatggggat
tgggttggagtatgtgaagattctgcactctttgtttcaaagctaagacgtaagcgccgc
aggaatgaagtgccacatcaggttgaagttaagagagatgagcagcagggtgaagttcgc
atattttctgatgcgggaaggattctgcgccctcttcttgttgtttcaaatctaaagaaa
atcaaagctttgaaagggggagactatggctttcaatctcttctggacaatgggattatt
gagcttataggacctgaagaagaagaagactgtcgaactgcatggggagttgaatacctc
ttaaaagcagataaggagaacccacccgccaagtatacccattgtgagttagacatgtca
ttcctattaggcttgagctgtggtattatcccttttgcaaatcatgatcatgctaggaga
gtcctctatcagtctgaaaagcactctcagcaggctattgggttttcaacagtgaatcca
aacattagagttgatacaaatacccatcaattgtattatcctcagaggccacttttccgg
acaatgttgtcagattcccttgggaagcccaaatatgctcgttgccagaaaggaatgctt
ccacggcctgaatactacaatggtcaatgtgctattgttgcagtaaatgttcaccttggc
tataaccaagaagattcattggttatgaatcgtgcatcactggagcgtggaatgtttcgg
tcggagcatgttaggagctacaaggctgaggtcgacaataaggaagctattggaaagaag
ctaaagattgaggattctgttaactttgggaaaacccagagtaaaattggacgagtggac
agcctagatgatgatggttttccattcattggggcaaatctccagagcggggatatcata
attgggaaacacgcagaatcaggggctgatcacagtgtcaagctgaagcatactgaaagg
ggtatggttcaaaaggttctgctctctgccaatgatgaagggaagaactttgctgttgta
tctctgagacaagttcgttctccatgtcttggagacaagttctccagcatgcatggacaa
aagggtgtccttggatttctggaatctcaggagaatttcccttttacagctcaagggatt
gttccagacattgtaatcaatcctcatgcatttccttcaaggcaaacccctggtcagctg
ctggaagccgctttagggaagggcattgccctaggtggtggtcaaaaatatgccactccc
ttttccactttatcagttgatgccataatagagcagcttcatgggcgaggtttctcaaaa
tggggaaatgagagagtttacaatggccggacgggtgaaatggttcaaaacctgatcttc
atgggcccaacattctaccaacgcctcattcatatggctgaagacaaagtgaagttccgt
aataccggaccagtccatccccttactcgccaacctgtggcagacagaaaacgctttggt
ggaattaaatttggtgaaatggagcgtgactgtcttatagctcatggtgctgcagcaaac
ttgcatgaacgccttttcacactcagtgattcctcccaaatgcacatctgtgggaagtgc
aagaacatggcaaatgtaatccagaggtctgttcaaggtggtaaggtaaggggtccctat
tgccgcttctgtgaatcagttgaagatatagtgaaggttaatgtgccatatggtgcgaag
ttattgtgccaggagctcttcagcatgggcatatctctcaagtttgatactgaggtttgc
tag

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