Nicotiana tomentosiformis: 104100457
Help
Entry
104100457 CDS
T05025
Name
(RefSeq) uncharacterized protein isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104100457
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104100457
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104100457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-RING_2
zf-C3HC4_2
PHD_5
TPR_2
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
SHNi-TPR
TPR_12
TPR_10
TPR_7
TPR_1
Motif
Other DBs
NCBI-GeneID:
104100457
NCBI-ProteinID:
XP_070053178
LinkDB
All DBs
Position
3:complement(68276265..68333413)
Genome browser
AA seq
1680 aa
AA seq
DB search
MGRRKSKPNRSVGILEGEVPNGQSNGKNDAETAKKDVSFEVDVPFFVEIDRSNWLSDEHM
DISEIVLSDLNVSEEFCHYVLDEEFYRDSRYILRFRVSNVDEYLNRIKLGHWPVFPASSI
CLEIVVKKEKEGLEENVVLVEGNFDGPDEGISGLVHLASLKFLTLRPVTGHIVPSCLASI
RLRVEILRSAFDACESLLDTSRQLWKKSMMHVMAWLRPEVVTSEARYGYEVAAHSDVGLA
SGLAESSASRKCSRFDVASFYEAIKPSKEEPMLDDNLPGLLPKLRPYQRRAAYWMVQREK
RNFDGSLQSKINRFISPLCMQLSLIETSMTIYYNPFCGNVSLHAEIAPPVVPGGILADEM
GLGKTVELLACIFTHPVASSCVGNFTGELLCDEGQKNSLKRLKRERVECICGSVSESIRY
KGLWVQCDVCDAWQHADCVGYSPKKKYAKCEAILNGQQSTVNMCKRAKRKNDVKIVEMEG
CYICEPCSELIQATVAPVATGATLIVCPAPILPQWHAEIVRHTNPDVLKTCIYEGVRTSS
LSQMPLPDIDELLSADIVLTTYDVLKEDLSHDSDRHEGDRRAMRFEKRYPVIPTLLTRIL
WWRICLDEAQMVETNAAAATEMALRLHGVHRWCITGTPIQRKLDDLFGLLRFLNASPFNI
FRWWTDIIRDPYEKGDSRAMAFTHDFFKHLMWRSSKVNVADELQLPPQEECVSWLSLSPI
EEHFYQRQHETCVNDACELIESFKNDIYKRKAPGSQLEDAASDVVITNIEAAKLFNSLLK
LRQACCHPQVGSSGLRSLQQSPMTMEEILSVLVSKTKVEGEEALRRLVVALNALAGIAII
NQNYSQAVSLYQEALALAEDHFEDFRLDPLLNIHITHNLAEILPLSSDSSKKLESAPGSP
RDKVSNMEDAGQSNKGALQGEDKIKEESILVTSSGDPSNLMSNSLAKDSVDENSETKLKL
STCTSYESLRTACERLKKKFLSVFSLKLAGVQQEFKKSYDQVCNAFTDRKNQYSAWWLEV
LHHIEQNKDSSNELIRKIGEAVSGTLNTSRASKVASCFRSITALKIYIQSGLDSLESSRE
SLLVKLFEIDKTMGNPRKEDIARVRYCPECYADADGVLCVHCELNDLFQVYEARLFRLNK
GKRGEVITSAEEAVDLQKKKSALNRFYTTLARTDKNSGSATAEYEDFGKKRDLEDIMVSK
APSDLEVVLGLIKSNSRGLLDAEGVLAAKKQLQLLEGMRKEYAQARLLSTAQAHVLRAHD
EIMMATSRLRLKEDENDKSIDALDQGELDAASAEWSSEKFFFLSSLSRTKGQLRYLKGLV
QSKQNNHCASSENSTIAQATMDSAAHAEEKTEHQARTEERTCPVCQEKLNNQKMVFQCGH
VICCKCLFAMTEQRLALHGKPQVNWLMCPTCRQHTDCRNIAYADDSQNKSYPSSSIASEN
SEASVNVRGSYSTKIEAVTRRILWITSSNLAAKVLVFSSWNDVLDVLEHAFAANNITFVR
MKGGRKAHVAISQFRGLNSNVKETGKRHAGQPETRSIQVLLLLIQHGANGLNLLEAQHVI
LVEPLLNPAAEAQAIGRVHRIGQAHKTLVHRFIVKDTVEESLYKLNRSRNIGSFVSGNRK
NQDQPILTLRDVESLFRVAPSTDEKATGSLTHLPPSVAAAIAAERRLSERTSCQEPPEHC
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaggaaatctaagccaaatcgttcagtaggaattttggaaggagaagttcct
aatgggcaatcaaacggcaaaaatgatgctgaaactgcgaaaaaagatgtgtcttttgaa
gttgacgtgccatttttcgttgaaattgacaggtctaattggttgtctgatgaacatatg
gatatttctgaaattgttttatctgacttgaatgttagtgaagagttttgtcactatgta
ttggatgaggagttttaccgggattcgaggtatatattgaggtttagggtgagtaatgtt
gatgagtatcttaataggataaagttaggtcattggcctgtattccctgctagtagtata
tgtttggaaattgtagtgaaaaaggagaaggagggtttggaggaaaatgttgtgttggtg
gagggaaattttgatggacctgatgaaggtatatcggggctagtccatttggctagtttg
aaattcttgacgttgaggcctgttacggggcatattgttccaagttgtttagcatctata
cggttgagggtggagattttaagaagtgcatttgacgcgtgtgagtcacttcttgataca
tccagacagctatggaaaaagagcatgatgcatgtgatggcttggctacgtccagaggtt
gtgacttcagaggctagatatggatacgaggtggcagcacattcagatgttggtctagct
tcagggctggctgaaagttctgcttcaaggaaatgttctaggtttgatgtagctagtttc
tatgaagctattaagccatcaaaggaggagccgatgctggacgataacctccctggtttg
cttcctaagcttagaccttaccagcgtcgtgcagcttattggatggtgcagagggagaaa
agaaattttgatggctctttgcaaagcaaaataaatcgctttatttctcctctatgtatg
caactgagtttaattgagacctctatgacaatatactacaatccattttgtggaaatgta
tccttgcatgcagagattgccccaccagttgttcctggtggtattttagctgatgagatg
gggctgggaaaaactgttgagctgcttgcctgtatatttacacatccggtggcatcatct
tgtgttggcaattttactggtgaattgctgtgtgatgagggtcagaaaaatagtctgaaa
agactgaaaagagagcgtgttgagtgtatatgtggttctgtgagtgaaagcatcagatat
aaaggattgtgggttcagtgtgatgtttgtgatgcgtggcaacatgcagattgtgtgggt
tactcacctaaaaagaaatatgcaaaatgcgaagcaatcttaaatggacagcagtcaact
gtcaatatgtgcaagcgagctaaacgcaaaaacgatgttaaaatagttgagatggaaggc
tgctatatctgcgaaccatgctcagaactgatccaagctactgtagcgccggttgccaca
ggtgcaactcttatagtgtgtccagctcctatattgccccagtggcatgctgaaattgtt
cgtcatacaaatcctgatgtgctgaaaacatgcatttatgaaggcgtgaggactagctct
ttatcacagatgcccttgccagatatagatgagcttctcagtgccgacatcgttttgaca
acttatgacgtactgaaagaggacttatcacacgactctgacaggcatgaaggtgatcgt
cgagctatgagatttgagaaaagatatcctgttatacctactctactaaccagaatatta
tggtggaggatatgtctggatgaagctcaaatggtagagactaatgctgctgctgcaact
gaaatggcactaagactacatggagttcatcggtggtgcattacagggactcccatacaa
aggaaacttgatgacttgtttggtcttttgagattcctcaatgcaagtccttttaatatt
tttaggtggtggaccgatattatacgtgatccttatgagaagggagattccagagcgatg
gctttcacacatgatttctttaagcacctaatgtggaggtcatcaaaagtgaatgttgct
gatgaactgcagcttccacctcaagaagagtgtgtctcttggctttctctttcaccaatt
gaagagcacttttatcaaaggcagcatgagacttgtgtgaatgacgcttgtgagcttatt
gaaagtttcaaaaatgatatatacaagagaaaagcacctggttcccagttggaagatgct
gcatcagatgttgttatcacaaatatagaggctgccaagctctttaactcacttctaaaa
ctacgccaagcctgttgccacccccaagtggggagttctgggttgcgatcactacaacag
tctcccatgactatggaggagattctgtcggttctggtgagtaagactaaggtagaagga
gaggaagccctccggagattagttgttgcattaaatgcactggccggtattgctataatt
aatcaaaattattctcaagccgtatcattataccaagaagcactcgctttagcagaagac
catttcgaggatttccggttggatcccttattaaacattcatattactcataatcttgct
gagatactcccactcagttctgacagttcgaaaaagcttgaatctgcgcctggaagccct
agagataaagtatccaacatggaagatgctggacaaagtaataaaggtgctctacaaggg
gaagacaaaattaaggaggaaagcattttagtcactagctctggcgatccatccaactta
atgtcaaattcattggcaaaagattctgttgacgaaaattctgagactaagttaaaatta
tccacttgtacaagttatgaatcattgagaacagcatgtgaaaggttgaagaaaaaattc
ttatccgtgtttagtttgaagctggcaggggtccaacaagagttcaagaagtcatatgat
caggtatgtaacgcatttactgatagaaagaaccagtattctgcttggtggttggaagtt
ttacatcatatcgagcaaaacaaggactcctcaaatgaattgatcaggaaaataggagaa
gctgtgtctgggacgctaaacacctctagggcatcaaaagttgcttcctgtttccgcagc
ataactgctttgaagatttatattcagagtggtttagattcattggaaagttcaagggaa
tctttacttgttaagctttttgaaattgacaagacaatgggcaatcctaggaaggaggat
attgctcgtgttagatactgtccggaatgctatgctgatgccgatggggtattatgtgtt
cactgcgaattaaatgacttgttccaggtttatgaggccagactttttcgtcttaacaag
gggaagcgtggagaggtgattacatctgctgaggaggctgtagatctgcagaagaagaag
tctgcactgaatcgtttctatactactctagcccgaacagacaaaaattcaggttcagct
accgccgaatatgaagattttggaaagaagagggacttagaggacattatggtgtcgaaa
gctccatctgatttggaagtagtgttgggccttattaaaagcaactccaggggcctatta
gatgctgaaggtgtattggcagccaaaaaacagctgcagcttcttgaggggatgcgaaag
gagtatgctcaagcaaggctcctgtcgacagctcaagcacatgttctacgtgctcatgat
gagattatgatggcaacttctcgactacgcctaaaagaggatgagaatgacaaatctatt
gatgccttagatcaaggagaattagatgcagccagtgctgaatggtccagcgaaaagttt
ttctttttatcttctttgtcaagaacaaagggacaacttcgctacttaaagggtttggtt
caatctaaacaaaataatcattgtgcaagtagtgaaaattcaactatagctcaagccaca
atggactcagcggctcatgcagaagaaaaaacggaacaccaagctagaacagaggaacgt
acatgccctgtttgtcaagagaagctcaataaccaaaagatggttttccaatgtgggcat
gtcatttgctgtaaatgtctgtttgcaatgacagagcaaagattagccctccatgggaag
cctcaagttaactggttaatgtgcccaacgtgtagacagcatactgactgcagaaatatt
gcttatgctgatgacagtcagaataagtcatatccatcttcttcaatagcctctgagaat
tctgaagcatctgtaaatgtccgaggttcatatagcacaaagattgaagctgtcaccagg
agaattttatggatcacttcctcgaacctagcagcaaaggttctagtctttagcagttgg
aatgacgtgcttgatgtgttagagcatgcgtttgcagctaacaacataacttttgtgcgg
atgaaaggaggaaggaaagcacatgttgccatcagccaattcagaggccttaacagcaat
gtcaaagaaactggcaagagacatgcagggcaaccagaaaccagatccattcaagtattg
ttgctcctaatccaacatggagccaatggcctcaatcttctggaagcccagcatgttata
cttgtcgaaccgctgctgaatcctgcagcagaagcacaagccattggcagggtgcatcga
attgggcaggcacataagactcttgttcatcgttttatagtgaaagacacagttgaggag
agcttatataagttgaataggagcaggaatatcggttcatttgttagtggcaacagaaag
aatcaagatcagcccattttgacactaagagatgttgaatccttattcagggtggcacct
tccactgatgaaaaggcaactgggagcttgacgcatttgccaccttctgttgctgctgct
atagctgctgagaggaggcttagtgaacggacatcttgtcaagagccaccagagcactgt
tga
DBGET
integrated database retrieval system
