Nicotiana tomentosiformis: 104100484
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Entry
104100484 CDS
T05025
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104100484
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
HATPase_c
GAF
HisKA
PAS_9
PAS_4
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
104100484
NCBI-ProteinID:
XP_009606016
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Position
9:60819205..60828118
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AA seq
1131 aa
AA seq
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MASGSRTKHSHQSGQVQAQSSGTSNVNYKDSISKAIAQYTADARLHAVFEQSGESGKSFD
YSQSVKTITQSVVPEQQITAYLTKIQRGGHIQPFGCMIAVDEASFHVIAYSENACEMLSL
TPQSVPSLERPEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYA
ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKLLCDTVVES
VRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRM
IVDCHATPVRVVQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEE
AVGGRSSMRLWGLVVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLR
TQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVEWL
LTYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGA
KHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEASNS
KAVVHAQLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTDLS
VEEAMGKSLVHDLVHKESQETAEKLLFNALRGEEDKNVEIKLRTFGPEQLKKAVFVVVNA
CSSKDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCC
SEWNTAMEKLTGWSRGEIIGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGVQDTDKFP
FSFFDRNGKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQEKKCYSQMK
ELAYLCQEIKSPLNGIRFTNSLLEATDLTENQKQYLETSAACERQMYKIIRDVDLENIED
GSLTLEKEEFFLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQQVLAD
FLLNMVRYAPSPDGWVEIQLQPNMKQISDEVTVVHIEFRIVCPGEGLPPELVQDMFHSSR
WVTKEGLGLSMCRKILKLMNGDIQYIRESERCYFLIILDLPMHRRGSKSLG
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggaagtagaacaaagcattctcatcagtcaggtcaagttcaagctcaatct
tcaggcacaagtaatgttaattacaaagattcaataagcaaagccatagcacagtacaca
gctgatgctaggcttcatgctgtgtttgaacaatctggtgagtctggcaagtcttttgat
tattcacagtctgttaaaactattacacaatctgttgttcctgaacagcaaattactgct
tatttgactaaaatccaaagagggggtcacattcagccttttggttgtatgatagctgta
gatgaggctagttttcatgttattgcttatagcgaaaatgcgtgcgaaatgcttagtcta
actccacaatcagttccaagccttgagcggcctgagatcctcactgttggaactgatgtt
aggaccctttttactccttctagctctgttttgcttgaaagagcatttggggcgcgcgag
atcactttgctgaatcctatttggattcattccaagaattctggcaagccattttatgca
attttgcatagggttgatgtcgggattgtaattgatttggagcctgctagaacagaggac
cctgctttatccattgctggcgcagtgcagtcgcaaaaacttgcagtgagggctatttct
catttgcaatcacttcctggtggggatgttaagcttttgtgtgatactgtggttgagagt
gtgagggagttaaccgggtatgatcgggttatggtatataaatttcatgaggatgagcat
ggggaggtagtggctgagagcaaaagaccggatttagagccctatattggtttgcattat
cctgctaccgacattcctcaagcttcacggtttttgtttaagcagaacagggtaagaatg
attgtggactgccatgccacccctgtgcgggttgttcaggatgaatcactgatgcagcct
ttatgtttagttggttccacacttagagcccctcatggttgccacgcgcagtacatggca
aatatggggtctattgcgtcattaacactagcagttattatcaatggaaacgatgaggaa
gctgttgggggccgaagttcaatgaggctatggggcttggttgttggacaccatacttct
gctaggtgcattccattccctcttcggtatgcctgtgaattccttatgcaggcctttgga
ctccaattgaacatggagctgcaactggcatcacagttgtctgagaaacatgtgttgagg
acacaaacactgttatgtgacatgctccttcgagactcacctacggggattgttacccag
agccccagtattatggaccttgtgaagtgcgatggcgctgctctgtactgtcaggggaag
tactatccattaggcgttacaccaactgaagctcagataaaggacattgtggagtggtta
ttgacttaccatggggactcaacaggtttaagtactgacagtttggctgatgcagggtat
cctggggcagcttcgcttggtgatgcagtttgtggtatggctgttgcttatataacttct
aaagatttcttgttttggtttcgctcccatacagcgaaagagataaagtggggtggtgca
aagcatcatcctgaagacaaggatgacgggcagagaatgcatccacgttcttctttcaag
gcatttctggaagttgttaaaagccggagcttaccatgggaaaatgcagaaatggatgca
attcactctctgcagcttattctgcgagattcatttaaggatgccgaggcaagtaattct
aaggctgttgtgcatgctcagcttggggaaatggagttgcaagggatagatgaactgagt
tctgttgccagagaaatggttagattgatagagactgcaactgctcccatatttgctgtt
gatgtcgaaggtcgcattaatgggtggaatgcaaaggtcgctgaattgacagatttatct
gttgaagaagcaatggggaagtccttggttcatgatcttgtgcataaagagtcacaggag
actgctgagaagcttctcttcaatgctctgagaggcgaagaagataaaaatgtagaaata
aagttaaggacatttggacccgagcaactgaagaaggctgtttttgtggtggttaatgct
tgctctagcaaagattacacaaacaacattgttggtgtttgttttgttggccaggatgtt
actgggcaaaaagttgtaatggacaagtttattcacatccaaggtgattacaaggccatt
gtgcacagccccaatcctctgatcccacccatatttgcgtcagatgagaacacttgttgc
tctgagtggaacactgccatggaaaagctcactggttggtccagaggggagatcattgga
aaaatgttagttggtgagatttttggaagttgctgtcggctcaagggtccagatgccatg
acaaagttcatgatcgtgttgcataatgcgattggagtccaggatacggacaagtttcca
ttttccttttttgaccgaaatgggaaatatgtgcaagctcttttgactgcgaacaagaga
gtcaatatggagggccagattatcggggctttctgtttcatacagatagccagtcctgaa
ttgcagcaagctctaagagttcaaaggcaacaggaaaagaagtgttattctcagatgaaa
gagttggcatacctttgtcaggaaataaagagtcctttgaatggtatacgctttacaaat
tcattgttggaagcgacagatttgacagaaaaccagaagcagtatctggagacaagtgct
gcttgtgagaggcagatgtataagatcataagggatgttgacctggaaaacattgaggat
ggctcactgacccttgagaaagaagaatttttccttgggagtgtaatagatgctgttgtt
agccaagtgatgttattgctgagggaaagaagtgtgcaattaatcagggatattccagag
gaaattaagaccttaacagtacatggtgatcaagtgagaattcaacaggtcttggcagat
ttcttgcttaacatggtacggtatgcaccatcacctgatggttgggtagagatccaactt
cagccaaatatgaagcaaatatctgatgaagtaactgttgtgcatattgaattcaggatt
gtatgccctggtgaagggcttcctcctgaattggttcaagacatgttccacagcagtcgg
tgggtaaccaaggaaggcctaggactgagcatgtgcagaaaaatcttaaagcttatgaat
ggagatatccagtatatcagagaatcagaaagatgttatttcctgatcatccttgaccta
ccaatgcaccgcagaggttcaaagagtcttggctag
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