KEGG   Nicotiana tomentosiformis: 104100484
Entry
104100484         CDS       T05025                                 
Name
(RefSeq) phytochrome B
  KO
K12121  phytochrome B
Organism
nto  Nicotiana tomentosiformis
Pathway
nto04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:nto00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    104100484
SSDB
Motif
Pfam: PHY PAS PAS_2 HATPase_c GAF HisKA PAS_9 PAS_4 PAS_8 PAS_3
Other DBs
NCBI-GeneID: 104100484
NCBI-ProteinID: XP_009606016
LinkDB
Position
9:60819205..60828118
AA seq 1131 aa
MASGSRTKHSHQSGQVQAQSSGTSNVNYKDSISKAIAQYTADARLHAVFEQSGESGKSFD
YSQSVKTITQSVVPEQQITAYLTKIQRGGHIQPFGCMIAVDEASFHVIAYSENACEMLSL
TPQSVPSLERPEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYA
ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKLLCDTVVES
VRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRM
IVDCHATPVRVVQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEE
AVGGRSSMRLWGLVVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLR
TQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVEWL
LTYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGA
KHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEASNS
KAVVHAQLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTDLS
VEEAMGKSLVHDLVHKESQETAEKLLFNALRGEEDKNVEIKLRTFGPEQLKKAVFVVVNA
CSSKDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCC
SEWNTAMEKLTGWSRGEIIGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGVQDTDKFP
FSFFDRNGKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQEKKCYSQMK
ELAYLCQEIKSPLNGIRFTNSLLEATDLTENQKQYLETSAACERQMYKIIRDVDLENIED
GSLTLEKEEFFLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQQVLAD
FLLNMVRYAPSPDGWVEIQLQPNMKQISDEVTVVHIEFRIVCPGEGLPPELVQDMFHSSR
WVTKEGLGLSMCRKILKLMNGDIQYIRESERCYFLIILDLPMHRRGSKSLG
NT seq 3396 nt   +upstreamnt  +downstreamnt
atggcttctggaagtagaacaaagcattctcatcagtcaggtcaagttcaagctcaatct
tcaggcacaagtaatgttaattacaaagattcaataagcaaagccatagcacagtacaca
gctgatgctaggcttcatgctgtgtttgaacaatctggtgagtctggcaagtcttttgat
tattcacagtctgttaaaactattacacaatctgttgttcctgaacagcaaattactgct
tatttgactaaaatccaaagagggggtcacattcagccttttggttgtatgatagctgta
gatgaggctagttttcatgttattgcttatagcgaaaatgcgtgcgaaatgcttagtcta
actccacaatcagttccaagccttgagcggcctgagatcctcactgttggaactgatgtt
aggaccctttttactccttctagctctgttttgcttgaaagagcatttggggcgcgcgag
atcactttgctgaatcctatttggattcattccaagaattctggcaagccattttatgca
attttgcatagggttgatgtcgggattgtaattgatttggagcctgctagaacagaggac
cctgctttatccattgctggcgcagtgcagtcgcaaaaacttgcagtgagggctatttct
catttgcaatcacttcctggtggggatgttaagcttttgtgtgatactgtggttgagagt
gtgagggagttaaccgggtatgatcgggttatggtatataaatttcatgaggatgagcat
ggggaggtagtggctgagagcaaaagaccggatttagagccctatattggtttgcattat
cctgctaccgacattcctcaagcttcacggtttttgtttaagcagaacagggtaagaatg
attgtggactgccatgccacccctgtgcgggttgttcaggatgaatcactgatgcagcct
ttatgtttagttggttccacacttagagcccctcatggttgccacgcgcagtacatggca
aatatggggtctattgcgtcattaacactagcagttattatcaatggaaacgatgaggaa
gctgttgggggccgaagttcaatgaggctatggggcttggttgttggacaccatacttct
gctaggtgcattccattccctcttcggtatgcctgtgaattccttatgcaggcctttgga
ctccaattgaacatggagctgcaactggcatcacagttgtctgagaaacatgtgttgagg
acacaaacactgttatgtgacatgctccttcgagactcacctacggggattgttacccag
agccccagtattatggaccttgtgaagtgcgatggcgctgctctgtactgtcaggggaag
tactatccattaggcgttacaccaactgaagctcagataaaggacattgtggagtggtta
ttgacttaccatggggactcaacaggtttaagtactgacagtttggctgatgcagggtat
cctggggcagcttcgcttggtgatgcagtttgtggtatggctgttgcttatataacttct
aaagatttcttgttttggtttcgctcccatacagcgaaagagataaagtggggtggtgca
aagcatcatcctgaagacaaggatgacgggcagagaatgcatccacgttcttctttcaag
gcatttctggaagttgttaaaagccggagcttaccatgggaaaatgcagaaatggatgca
attcactctctgcagcttattctgcgagattcatttaaggatgccgaggcaagtaattct
aaggctgttgtgcatgctcagcttggggaaatggagttgcaagggatagatgaactgagt
tctgttgccagagaaatggttagattgatagagactgcaactgctcccatatttgctgtt
gatgtcgaaggtcgcattaatgggtggaatgcaaaggtcgctgaattgacagatttatct
gttgaagaagcaatggggaagtccttggttcatgatcttgtgcataaagagtcacaggag
actgctgagaagcttctcttcaatgctctgagaggcgaagaagataaaaatgtagaaata
aagttaaggacatttggacccgagcaactgaagaaggctgtttttgtggtggttaatgct
tgctctagcaaagattacacaaacaacattgttggtgtttgttttgttggccaggatgtt
actgggcaaaaagttgtaatggacaagtttattcacatccaaggtgattacaaggccatt
gtgcacagccccaatcctctgatcccacccatatttgcgtcagatgagaacacttgttgc
tctgagtggaacactgccatggaaaagctcactggttggtccagaggggagatcattgga
aaaatgttagttggtgagatttttggaagttgctgtcggctcaagggtccagatgccatg
acaaagttcatgatcgtgttgcataatgcgattggagtccaggatacggacaagtttcca
ttttccttttttgaccgaaatgggaaatatgtgcaagctcttttgactgcgaacaagaga
gtcaatatggagggccagattatcggggctttctgtttcatacagatagccagtcctgaa
ttgcagcaagctctaagagttcaaaggcaacaggaaaagaagtgttattctcagatgaaa
gagttggcatacctttgtcaggaaataaagagtcctttgaatggtatacgctttacaaat
tcattgttggaagcgacagatttgacagaaaaccagaagcagtatctggagacaagtgct
gcttgtgagaggcagatgtataagatcataagggatgttgacctggaaaacattgaggat
ggctcactgacccttgagaaagaagaatttttccttgggagtgtaatagatgctgttgtt
agccaagtgatgttattgctgagggaaagaagtgtgcaattaatcagggatattccagag
gaaattaagaccttaacagtacatggtgatcaagtgagaattcaacaggtcttggcagat
ttcttgcttaacatggtacggtatgcaccatcacctgatggttgggtagagatccaactt
cagccaaatatgaagcaaatatctgatgaagtaactgttgtgcatattgaattcaggatt
gtatgccctggtgaagggcttcctcctgaattggttcaagacatgttccacagcagtcgg
tgggtaaccaaggaaggcctaggactgagcatgtgcagaaaaatcttaaagcttatgaat
ggagatatccagtatatcagagaatcagaaagatgttatttcctgatcatccttgaccta
ccaatgcaccgcagaggttcaaagagtcttggctag

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