Nicotiana tomentosiformis: 104100640
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Entry
104100640 CDS
T05025
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104100640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104100640
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104100640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
AXE1
Motif
Other DBs
NCBI-GeneID:
104100640
NCBI-ProteinID:
XP_009606206
LinkDB
All DBs
Position
6:complement(35054772..35059958)
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AA seq
459 aa
AA seq
DB search
MMETDMGKLFIGGISWDTDEERLKEYFSSYGEVVEAVIMRDRNTGRARGFGFVVFANHAV
AHRVVQEKHIIDGRTVEAKKAVPRDDQQTINRNSSSIQGSPGPGRTKKIFVGGLASTVTE
SDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEDAVDRALYKTFHDLNGKMIEVK
RAVPKEMSPGPNRSPFNGYNYGLGRANNFLNNYAQGYSLGSIGGYGVRMDGRFNPIASGR
TSVSQFSSPAYGMGANLDPALSPTFAGASNFNNNNLGYGRVLSPYFSGNSSRYATPIGYS
TGSSRADSFLSSPTRNVWGNGGLNRSPSPGISGSFLGSGTGIYGVFGNNGANWGSSAPVG
NSTGQTVGFRSAGNSYGLGSGGLGRSNAAGFAASSGSYEGPYGSMYGDPTWQAVSSDADG
SGSFGYGLENPTDVSAKDSENYIGNYNIANRQSNRGIAA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagatatgggtaagctatttataggtgggatatcttgggacacagatgag
gaacgtcttaaagaatatttcagttcgtatggagaggtggtggaagctgtgatcatgaga
gatcgcaacacgggtcgtgctcgtggttttggctttgttgtctttgccaatcatgcagtt
gctcacagagttgttcaagagaagcacatcatcgatggcagaacggttgaggcaaagaag
gctgttcctagggatgaccaacagacaataaatagaaacagcagcagcattcaaggatct
ccgggtcctggacgcacaaaaaagatatttgttggaggtttagcatctactgttactgag
agtgacttcaagaaatactttgatcagtttggtataattacagatgttgtagtgatgtat
gaccacaacactcagaggccaagaggctttggttttataacttatgattcggaggatgca
gtggatagggcattgtataagacctttcacgacctaaacggtaaaatgattgaggtgaag
cgcgccgttccgaaagagatgtctccagggcccaaccggagccctttcaacggatacaac
tacggacttggtagagcaaataactttctcaacaactatgctcaagggtatagtctaggt
tcgattggaggatatggggtcaggatggacggtaggtttaatccaattgccagcggacgt
acaagcgtctctcagttttcttctcctgcttatggaatgggtgccaatttggacccagct
ttgagccccacctttgcaggagcttccaactttaacaataataatcttggttatgggcgg
gttctgagcccatatttcagcggcaactcaagcagatacgctacacccattggatatagc
acagggagcagtagagctgattcttttcttagctccccaaccaggaatgtatggggaaat
ggtggtcttaaccgttctccaagtcctggtatctccggttcatttttgggttctgggact
ggtatttatggggtctttgggaataatggtgccaattggggctcttctgctccagttggt
aattctactggtcagactgttgggttcaggagtgcgggaaacagttatgggcttggatct
ggaggacttggaagaagcaatgcagcaggttttgctgcatctagtggttcttatgaggga
ccttatggctcaatgtatggtgatccgacttggcaagctgtgtcttctgatgcggatggt
tctggttcatttggatatggacttgaaaatccgacagatgtttcagctaaagactccgag
aattatattggaaattataacattgcaaatagacaatcgaatagaggaattgcggcgtag
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