Nicotiana tomentosiformis: 104100682
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Entry
104100682 CDS
T05025
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Module
nto_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104100682
Enzymes [BR:
nto01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104100682
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104100682
NCBI-ProteinID:
XP_009606259
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Position
6:5554095..5559351
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AA seq
420 aa
AA seq
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MCSSNSSYTMKTLVLLFILGLTNSRISYASIIGYAGSFNVLDYGAAADGITDDSQAFLNA
WNDACSSAGGSPEVIIPPNMIFLLSPVTFRGPCNSENIYFVISGRLVAPSSPGIWTGQDA
SQWLAFRNVSGLIVDGSGTIDGQGQGWWDQSCRYHPDMEGCTRLAPTALKFIFCSQSSIS
NIYFGNSAQTHILIERCNGFKVDSVMIESPGNSPNTDGIHIQSSQYVAITNSKISSGDDC
ISIGDYTSNVQIYNIQCGPGHGISIGSLGKGGNFAQVENIHVSNAFFYGTTNGARIKTWQ
VGRGYVRDVIFENLEFNSVKNPIIIDQNYCDVRGACKEMVTGVQISNVIYQNIFGTSSTN
IAINLNCSMSVPCTDITMQLIQLTSATPGTATPGREVTAYCRNAYGQEYSIEPGPCISEY
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcctctaactcttcatataccatgaaaactttggttctcttgttcattcttggc
ttgacaaattcaagaatatcctatgcaagtataattggatatgcaggaagttttaatgtc
ctggattatggagctgctgctgatggtattacagatgattctcaagcatttcttaatgct
tggaatgatgcatgttcatcagctggtggatctcctgaagtgattattcctccaaatatg
atatttttacttagtcctgtcacattcagaggtccctgcaattctgaaaacatctatttt
gtgatatcaggtagacttgttgcaccaagctcacctggtatatggaccgggcaggatgcg
agtcagtggctggcgtttagaaatgttagcggtctaattgtcgatggctcaggaaccatt
gatgggcagggacaaggatggtgggatcaatcatgtagataccaccctgacatggaagga
tgtacaagattagctcctactgccttgaagttcattttttgcagtcagagttctattagt
aacatttactttggcaacagtgcccaaactcatatacttatagagagatgcaatggattc
aaagtggatagtgtaatgattgaatctccaggaaatagtccaaatactgatggaattcac
attcagtcttctcaatatgtggccattaccaattctaaaataagcagtggggatgattgc
atttcaattggagattacacttctaatgtccaaatatacaatatccaatgtggaccaggt
catggtataagtattggaagcttaggaaaaggtggtaattttgctcaagtagaaaacatt
catgtgagcaatgctttcttctatggaactacaaatggagctcgtatcaagacatggcag
gttggcagaggatatgtacgagatgttatatttgagaatcttgaatttaactcagtcaag
aaccccattataattgaccagaattactgcgatgttcgaggagcttgcaaggaaatggta
actggagtgcaaatcagcaatgttatttaccagaatatatttggaacatcgagcacaaat
atcgccataaatctgaactgcagtatgtcagtgccatgtactgatataacaatgcaacta
atacaactaacatcagcgacaccaggaacagcgacaccaggaagggaagtcactgcttat
tgtaggaatgcttatggccaagaatatagtattgaacctggtccttgtatctcagaatat
tga
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