KEGG   Nicotiana tomentosiformis: 104101166
Entry
104101166         CDS       T05025                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03020  RNA polymerase
nto03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104101166
  09124 Replication and repair
   03420 Nucleotide excision repair
    104101166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nto03021]
    104101166
   03400 DNA repair and recombination proteins [BR:nto03400]
    104101166
Transcription machinery [BR:nto03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     104101166
  RNA polymerase III system
   RNA polymerase III
     104101166
  RNA polymerase I system
   RNA polymerase I
     104101166
DNA repair and recombination proteins [BR:nto03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      104101166
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N OB_RNR_1st NA-iREase1 DNA_pol3_alpha
Other DBs
NCBI-GeneID: 104101166
NCBI-ProteinID: XP_009606888
LinkDB
Position
5:7350957..7355507
AA seq 206 aa
MTLSEEELSRLFRVRRTLMEMLADRGYLVGEFEINMSKHQFLQKYGENMKRDDLVIQKAK
RNNSSELIYVFFPEEAKVGVKTMKTYTERMKKEDVFQAILVVQQNLTPFARTCISEISTK
FHLEVFQEAELLVNIKNHVLVPEHQPLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG
LKRGQVVKIIRPSETAGRYITYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atgactctatcggaagaggagctctcgagacttttcagagttcgtaggacactgatggaa
atgttggcggataggggttaccttgttggagagtttgagataaatatgtcaaaacatcag
tttcttcagaagtatggtgagaatatgaagagagatgaccttgttattcagaaagccaag
cgcaacaatagttctgagctgatatatgtgttctttccagaggaggcaaaggttggtgtt
aagacaatgaaaacttatacggagcgcatgaaaaaagaagatgtcttccaggcaattctc
gttgtacaacaaaatttgactccctttgctcgtacctgcatttctgaaatatctacaaaa
ttccatttggaggttttccaggaagcagagctgttggtaaacataaaaaatcatgttcta
gttccggagcaccagccacttactcctgaagaaaagaagaccttgttggaacgatatact
gtgaaagaaacacagcttcctcgaattcagataacggatcctattgctagatattatggg
ctaaaacggggccaagtcgtgaagattatcagaccaagtgagactgcaggccgttatatt
acttaccgatatgtggtttga

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