Nicotiana tomentosiformis: 104101215
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Entry
104101215 CDS
T05025
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104101215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104101215
Spliceosome [BR:
nto03041
]
Common components
Common spliceosomal components
SR proteins
104101215
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
RRM_5
Motif
Other DBs
NCBI-GeneID:
104101215
NCBI-ProteinID:
XP_009606953
LinkDB
All DBs
Position
4:101540852..101552190
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AA seq
254 aa
AA seq
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MSHFGRTGPPDIKDTFSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYQDEAQKAVEKLDGRVVDGREIMVQFAKYGPNAERIDKGRILEPVQNTRGRSRSH
SPRSRHRDHYRDKDSKRRSRSRSRDRYDRDRYRGRDKDYRRRSRSRSPDYRKDRERGKYD
EERRSRSRSHRSVSPARRSLSPRRSPSPRRTTPSRDASPDGRNHKDRSPTPKSVSPRGRR
GGSRSPLPHSDADD
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttcggcagaacaggccctccggacatcaaagataccttctctcttctcgtt
ctcaacgttactttccgtaccaccgctgatgacttgtttcctttattcgataagtatgga
aaagtcgtcgatgtctttatccctagagaccgaaggactggagattctaggggttttgca
tttgtacgctacaagtatcaggatgaggctcaaaaggcagtggaaaagcttgatggaaga
gttgtagatggtcgagaaataatggttcaatttgcaaagtacggcccaaatgctgagaga
attgacaaaggtagaattttggagcctgtacaaaatacaagaggaaggtcaagaagccac
agtcctagatcaaggcatcgtgatcattatagggacaaggattctaaaaggagaagccga
agtagaagtagggacagatatgaccgtgataggtaccgtgggagagacaaggattaccgt
cgtcggagcagaagccgcagcccagattaccgcaaagatcgcgagagaggtaaatatgat
gaggagaggcgcagccgaagccggtctcatagaagtgtgtcccctgctcgccgtagcctc
agtcctcggaggagcccttctccacgtagaacaaccccttctagggatgctagtccagat
ggacgtaatcacaaagaccggtctccaactccaaagagtgtctcaccgcggggtagacgt
ggtggttctcgcagccccttgccgcattctgatgctgatgattaa
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