Nicotiana tomentosiformis: 104101685
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Entry
104101685 CDS
T05025
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104101685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104101685
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104101685
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104101685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
104101685
NCBI-ProteinID:
XP_009607471
LinkDB
All DBs
Position
1:complement(45123423..45127254)
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AA seq
330 aa
AA seq
DB search
MEYDSIECVSSSDGIIDEDEIPQHINIIRSQFKTTHNNNNSNILCDGNSNKGGIAINPAT
SVHELLECPVCTNSMYPPIHQCHNGHTICSTCKARVHNRCPTCRQELGDIRCLALEKVAE
SLELPCKYGSLGCPEIFPYYSKLKHESSCNFRPYNCPYAGSECAVVGDIPYLVTHLRDDH
KVDMHSGCTFNHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRF
MGDETEARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLLIQRNMALFFSGGD
RKELKLRVTGRIWKEQQNPDEGACIPNLCS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggagtatgatagcattgaatgtgtatcatcttcagatggtattatagatgaagatgag
attccccaacacataaatataattcgttctcagttcaaaacgacccacaacaacaacaat
agcaatatcttatgtgatgggaatagcaataaagggggaattgcaataaatccagctact
agcgttcatgagcttcttgaatgccctgtttgtaccaattctatgtaccctcctattcat
cagtgtcataatgggcacactatctgttcaacatgtaaagcgagggtacacaaccgatgt
cccacttgtagacaggagcttggtgatatcagatgtttagcactagaaaaggtggctgaa
tcacttgagctgccttgcaaatatggctctcttggatgtcctgagatatttccttattac
agtaagctgaaacatgaatcatcctgcaattttagaccatacaactgcccgtatgctggg
tcagaatgtgcagttgttggcgatattccttatttggttactcatttgagggatgatcac
aaggtagacatgcactctggatgcacttttaaccatcgctatgtcaaatctaatcctcgg
gaagtggaaaatgccacgtggatgttaactgttttcaactgttttggtcagtacttctgt
ctccattttgaagcatttcagcttgggatggcacccgtatacatggcattcctacggttt
atgggagacgagacagaggcacgaaactacagctacagcctggaagtagggggaaatgga
aggaagcttatctgggaaggtacaccgcgaagcataagagacagtcataggaaagttagg
gatagccatgacgggctcctaatacaacgtaacatggccctattcttctccggtggggac
agaaaggagctcaagctacgggtgactggaagaatatggaaggaacaacagaatccagac
gaaggagcatgcattcccaacctctgtagttaa
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integrated database retrieval system
