Nicotiana tomentosiformis: 104101785
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Entry
104101785 CDS
T05025
Name
(RefSeq) ubiquitin receptor RAD23d-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03420
Nucleotide excision repair
nto04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104101785
09124 Replication and repair
03420 Nucleotide excision repair
104101785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nto03051
]
104101785
03400 DNA repair and recombination proteins [BR:
nto03400
]
104101785
Proteasome [BR:
nto03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104101785
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104101785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
Dsc3_N
UBA_RAD5A
TECR_N
CUE
Crinkler
UBA_3
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
104101785
NCBI-ProteinID:
XP_009607597
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Position
2:137385919..137400355
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AA seq
383 aa
AA seq
DB search
MKIFVKTLKGTHFEIEVKPEDTVADVKKNIETAQGQDIYPAAQQMLIHQGKVLKDTTTLE
ENKVAENSFVVIMLSKNKVSTSATSATQPTPSNTAQPATSTGQPTQTVTAPQATAASVAP
AQSAPQSAPTPAAAPVSANPVTDVYGQAASNLVAGSTLEATVQQILDMGGGSWDRDTVIR
ALRAAFNNPERAIEYLYSGIPEQAEIPPPAPAPASGQAVNPPVQASQPAVPSGGPNANPL
DLFPQGLPNVGSNAGAGNLDFLSNSPQFQALRAMVQANPQILQPMLQELGKQNPQLMRLI
QEHQADFLRLINEPVEGEGNVPGQPAGAIPQAVTVTPEEREAIERLEAMGFDRALVLQVF
FACNKNEELAANYLLDHMHEFDE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttgtgaagactttgaaaggcactcactttgagatcgaagtgaaacccgaa
gacacggttgctgatgtgaagaaaaacatagaaacagctcaaggtcaagatatctacccc
gctgcacaacagatgcttatccaccagggtaaagttctcaaggacactacaacgttggag
gaaaacaaagtcgctgagaatagttttgttgttataatgctttctaagaataaggtttca
actagtgcaacctcagctacgcaaccaacaccttcaaatacggcccaacctgcaacctcc
actggccaacctacacagactgtaacagcacctcaagcaactgctgcaagcgtggcgcct
gcacaatctgctcctcagtctgctcctactcctgccgctgcgccagtttccgctaatcct
gtgacagatgtgtatggccaagcggcatcaaatcttgttgccggaagtaccttagaagct
acagttcaacagattcttgatatgggtggtggaagttgggatcgggatacggttattcgt
gctctacgtgctgcatttaacaatccagagagagctattgaatacttgtactctggtatt
cctgagcaagcagaaattccacctcctgctcctgctcctgccagcggacaggcagtaaat
cctccagttcaggcttcacagccggcagttccgtccggtggcccaaacgctaacccttta
gatctctttcctcagggccttccaaatgtcggttcaaatgctggagctggaaatttagat
ttcttaagcaatagtccacagtttcaagcccttcgagcaatggtgcaagcaaacccgcag
atattgcagcctatgctccaggagttgggtaagcaaaatcctcaattgatgcggcttatt
caagaacatcaagctgactttctgcgcctcatcaatgaacctgttgagggggaggggaat
gtgcccgggcagccagcaggggcgataccacaagctgtgactgtcacaccggaagagcgc
gaggctatcgaacgacttgaagctatgggtttcgatcgagctttggtattgcaagtattt
tttgcatgcaacaaaaatgaggagctggctgcaaactatctcttggatcatatgcatgag
tttgatgaatga
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