KEGG   Nicotiana tomentosiformis: 104102018
Entry
104102018         CDS       T05025                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104102018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nto03019]
    104102018
   03041 Spliceosome [BR:nto03041]
    104102018
Messenger RNA biogenesis [BR:nto03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104102018
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104102018
Spliceosome [BR:nto03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104102018
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 104102018
NCBI-ProteinID: XP_009607897
LinkDB
Position
7:39510780..39511838
AA seq 352 aa
MVFLRCLHFLNAIELWLNVRLNKKTEQEMMSLQKMNQLLTNDQLNKIAEGISVFLPGVLE
NVLSSTKTKSYEGSIQRKLFVGSLGCNTTSETLHRFFSAYGEVEEAVVILDKSGVSKEYG
FVIFKHVKSALMALKEPYKRINGKTTITKVANSGARDRNDESLRTVYVANVPHNMLPGRV
LEYFSSYGVIEKGPFGFNKETGKSRGYAIFVYKTLEGAKTAIYEPIKWVDGHHLTCEMAI
GRTKKKPRVSLNSGPFNLNCHYQNSRSMFGGGGSRPEVSQVGVQYAQFQGNRDIYAQNCH
CGLVSNCNIQVQGLSPTVIGRNHIGSGLCTKLSHGDYSLWSSEFPRHNPVWF
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggtcttccttagatgtttgcatttcctaaatgcaatagagttatggttaaatgttcgt
ttgaacaagaaaacggagcaagaaatgatgagcctacagaaaatgaatcagcttcttact
aatgaccaactcaacaaaattgctgaaggcatctcagtttttcttcccggggtcctagaa
aatgtactttctagtactaaaactaaatcctacgaaggatctattcagcgaaagctcttc
gttggaagtctcggatgtaatactacatccgagactttgcatcgatttttctcagcctat
ggcgaagttgaagaagctgttgtcattttggataaatctggtgtaagcaaagagtatggc
tttgtcattttcaagcatgtaaagagtgcactaatggcactcaaggagccatacaagagg
attaatggaaagacgacaatcacaaaggttgctaattcaggagccagagacagaaatgac
gagtctttacgtacagtttatgtggctaatgtgccacataacatgttaccaggtagagtg
ttggaatatttttcctcttatggtgtaatagaaaagggtccttttggtttcaataaagaa
acaggaaagtcaagaggttacgctatttttgtgtacaaaacactagaaggggctaaaaca
gcaatttatgaacctatcaagtgggtcgatggacaccatttaacgtgtgaaatggccatc
gggaggacaaagaaaaaaccccgcgttagtcttaactcggggccattcaatttaaattgc
cattaccagaattcaagatcaatgttcggtggtggtggctcgagaccagaggtgtcacaa
gttggagttcagtatgcccagtttcaaggcaacagggacatatatgcacagaattgtcat
tgtggcctagtttctaattgtaacattcaggttcagggcttatcaccaacagttataggt
cgcaaccatataggctctgggctttgtactaagttgtctcatggcgattacagtctttgg
tcctcggaatttcctaggcataatccagtatggttttga

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