Nicotiana tomentosiformis: 104102384
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Entry
104102384 CDS
T05025
Name
(RefSeq) tRNase Z TRZ3, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nto03016
]
104102384
Enzymes [BR:
nto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
104102384
Transfer RNA biogenesis [BR:
nto03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
104102384
Prokaryotic type
104102384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
104102384
NCBI-ProteinID:
XP_009608382
LinkDB
All DBs
Position
3:complement(143536502..143542474)
Genome browser
AA seq
1012 aa
AA seq
DB search
MGGVLCSGALVNRLSKTLGLYMQTLQIIKMPQITNLRLLISSANHPRILSPLTPKPPPSL
SHLFRLKQPKSHTHNPHFLFAAFSSSYSRKPRNIEQPSSLRRRSSSKVDNKGKMTMEEKG
PTAESAGFNKRRAEGKDKNDGKKNLQLKVRKLNPVNTISYVQILGTGMDTQDTAPSVLLF
FDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFLSRVCSETAGGLPGLLLTLAGMGEEGMS
VNLWGPSDLKYLVDAMKSFIPNAAMVHARSFGPTVGSVDVSSAASGTSDDLYVPINDEVV
KISAVLLRPRYSKVSDTTKEGSSELDDPLVAVNHLAETLSVRRMHSTAEFALKPGDLSVV
YICELPEIKGKFDPKKAAALGLRPGPKYRELQLGNSVQSDRQDIMVHPSDVLGPSVPGPI
VLVVDCPTPSHLQELSSIHSLTPYYSYPSKQSKEMCKKVDCVIHLSPASVTCTTEYQQWM
SRFGEAQHIMAGHQPKNIEIPILKSSARIASRLNYLCPQFFPAPGFWSLPQLKRLSSVSK
IPSEFSLPASCQVITAENLLKFHLRPYAQLGLDRSGIPEITSRSKIIEELISEIPEILDA
SEHIAQMLHGINVTNGGSATIQANRVMIEEPWLHETALPSCLEGVTREDVEIVLLGTGSS
QPSKYRNVSSIFVNLFSKGSILLDCGEGTLGQLKRRFGIEGADEAVKGLRCIWISHIHAD
HHTGLARILALRRDLLNGTPHEPLIVVGPRQLKRFLDAYQKLEDLDMQFLDCRHTTEVSL
KTFESNGDKDVSESACVPSDQKNGSTLFAKGSRMESYWKRPGSAVDAAAAFPLLKTLKEI
LREAGLEALISFPVIHCPQAYGAVLKAADRTNSTGKKIPGWKIVYSGDTRPCPELVEASC
GATVLIHEATFEDGMVEEAIARNHSTTQEAIEVGDSAGAYRIVLTHFSQRYPKIPVFDET
HMHKTCIAFDMMSVNLADLPMLPRVLPYLKLLFRDEMIADESDDIDVATAAI
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggttttatgtagcggagctttagtcaaccggctttctaaaaccctggggctc
tatatgcaaacactacaaataataaaaatgccccaaatcacaaaccttcgcctcctaatc
tcctccgccaatcacccccgaattctctcacccttaacccctaaacctcctccctctctt
tctcacctcttcagactcaaacaacccaaatcacacactcacaacccccatttcctcttt
gctgcattctcttcttcatattcaagaaaaccgagaaacatcgaacagcccagttcgtta
agaaggcggagcagttcgaaggtagataataaagggaagatgacaatggaagagaagggt
ccaactgctgagtctgctggatttaataaaagaagggctgagggtaaggataagaacgat
gggaagaagaaccttcaactcaaagtccgcaaacttaaccctgttaatacaatctcatac
gtccagatacttgggaccggcatggatacacaagatacagcaccctcagttcttctattc
tttgataaacagaggtttatttttaatgctggagaaggattgcaacgcttctgcacagag
cacaaaattaagctgtcaaagattgatcacatatttctatcacgagtctgttcggaaact
gctggtggactgccaggtcttttattgactttggctggcatgggagaagaagggatgtca
gtcaatttatggggtccttcggatctcaagtacttggtcgatgcaatgaaatcattcatt
ccaaatgccgccatggtccatgcgcgtagttttggcccaactgttggatcggttgatgtt
agtagtgctgcttcagggacgagtgatgatctctatgttcctattaacgatgaggttgtc
aaaatatctgctgttttgttgcggccacgttactcaaaagtgtctgacacgacaaaggaa
ggatcctctgagctggatgatccactagtcgctgtcaatcatttggcagaaaccctttca
gtgcggaggatgcattccacagctgaatttgcattaaagcctggggatctttcggtggta
tatatttgtgagttgcctgaaattaagggaaaatttgatcccaaaaaggctgctgctctt
gggttgaggcctggcccgaaataccgtgaattgcaacttgggaattcagtacagtcagat
cgccaagatatcatggttcatcccagtgatgtattggggccttctgttcctggccctatt
gtactcgttgttgactgccctacaccatctcatctgcaagaattgtcgtctatacattct
ctcactccatattactcatatccatccaaacaatccaaggaaatgtgcaaaaaagttgat
tgtgtgatacaccttagtcctgcttcagtaacatgtacaactgaatatcagcaatggatg
tcaagatttggtgaggcgcagcacatcatggcaggacatcagccgaagaatattgaaatt
ccaattctgaagtcgagtgcaagaatagcctcaagactgaattatttgtgccctcaattc
tttcctgcgcctggtttttggtcccttccacagttgaagcgcttatcctcagtctctaag
atcccaagtgagttctctcttccagcttcatgtcaagttataacggcagagaacctcctc
aagtttcatcttcgtccatatgcgcagcttgggttagacagatctggtattcctgaaatt
acttctcggtcaaaaatcatagaagagttaatatcagaaattcctgaaatcttagatgct
tctgaacacattgcccagatgttgcatggcatcaatgttacaaatggaggcagtgcgact
atccaggctaacagagttatgatcgaagagccctggttgcatgaaactgcattacctagt
tgtttggaaggtgtaacaagagaggatgttgagattgttcttctcggaactggttcatct
cagccttcaaaatatcggaatgttagttctatttttgtcaatcttttctcgaagggaagt
attctgttagattgtggtgaaggaacattgggacagctcaaaagaagatttggtattgaa
ggtgctgatgaagccgtaaaaggtttaaggtgtatttggatctctcatattcatgctgat
catcatactggtcttgcaagaatacttgctctccgacgcgatttgctcaatggaactcct
catgaacctttaattgttgtgggcccacggcagcttaagagattccttgatgcataccaa
aaacttgaggatctagatatgcagttcctcgattgtaggcatactaccgaagtttcatta
aagacttttgagtcaaatggagacaaggatgtgagtgagagtgcatgtgtaccaagtgac
caaaagaatggttctaccttatttgctaaagggagccgtatggagagttattggaagagg
ccaggcagtgcggttgatgcagcggctgcattcccattgctgaagacattaaaggaaatt
ctcagagaagcaggattggaggcattgattagctttcctgttattcattgtccacaagca
tatggcgctgtcttgaaggctgctgataggactaatagcactgggaagaagataccagga
tggaaaattgtatactctggcgacactaggccttgtccagaactagttgaagcatcgtgt
ggtgcaacggttctcatacatgaggctacctttgaagatggcatggtggaggaagccata
gcaagaaatcatagcacaacacaggaagccatcgaagtaggggactctgctggagcatat
cgtatcgtcctcactcacttcagtcaaagataccctaaaattccggtttttgatgaaaca
cacatgcacaaaacatgcattgcttttgatatgatgagtgttaacttagcagacctaccc
atgcttccaagagttcttccatatcttaaactgctatttcgtgatgaaatgatagctgat
gaatctgatgatatcgatgttgctacagcagctatttga
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