Nicotiana tomentosiformis: 104102563
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Entry
104102563 CDS
T05025
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104102563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104102563
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104102563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
104102563
NCBI-ProteinID:
XP_009608593
LinkDB
All DBs
Position
2:113365796..113372345
Genome browser
AA seq
367 aa
AA seq
DB search
MSERKLVVLGIPWDVDTEGLREYMIKFGDLEDCIVMKERATGRSRGFGYVTFATVEDAKN
ALSKEHFLGNRMLEVKVATPKEEMRHPAKKVTRVFVARIPPSVSEATFRSYFEKYGEITD
LYMPKDPTTKGHRGIGFITFANAESVDDLMGDTHELGGSTIVVDRATPKEEDSRPVSRMP
QGGGGYGAYNAYISATRYAALGAPTLYDHPGSMYGRGGGYPSRGMGKKIFVGRLPQEATA
EDLRQYFGRFGRILDVYVPKDPKRPGHRGFGFVTFADDGVADRVSRRPHEICGQQVAIDS
ATPLDDAGPSSQYMMDPPPPPPPEPYGGYGGPMRSYGRMYGGLDYDDWGYGLGGGRPSRA
DMRYRPY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaggaagctggtggttttaggtatcccatgggacgtggatacagaaggtcta
agggaatatatgattaaatttggagacttggaggactgtattgtcatgaaggagcgtgct
actggtcgttctcgtggattcggatatgtaacatttgctacagttgaagatgctaagaat
gcattgtctaaggagcacttccttggaaacagaatgctggaagtgaaagtggcgacacca
aaggaggagatgaggcatcctgcaaagaaagttacccgggtttttgttgctagaattcca
ccgtcggtgtctgaagctactttcagaagttattttgagaagtacggtgaaataacagat
ctatacatgccaaaggatccaactacaaagggacatcgtggaattgggtttattactttt
gcaaatgctgaatcagttgatgatctgatgggtgacacacacgaactgggaggttccaca
attgtggtcgaccgagcaacgcccaaggaagaagattccagacctgttagtcggatgcct
cagggtggaggaggatatggtgcatataatgcatatattagtgcaactagatatgctgcg
cttggtgctcccacattatatgatcatccaggctctatgtatggacgaggaggaggatat
ccttctcgtggcatgggcaagaagatctttgttggtcgactacctcaagaggcaacagct
gaagatcttcgccagtattttggtagatttggccgtattttagatgtttatgttccaaag
gatcccaagagaccaggacacagagggtttggttttgtcacatttgctgacgatggtgtc
gcagatcgtgtttctcggaggcctcacgagatatgtggacagcaggttgcaatagattct
gccactccccttgatgatgctggtccaagtagtcagtacatgatggatcctcctcctcct
cctcctcctgaaccgtatgggggatatggtggtcctatgcgttcctatggtaggatgtat
gggggcctagactatgatgattggggttacggcctgggtggagggcgaccttcaagagca
gatatgagatacaggccctactag
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