KEGG   Nicotiana tomentosiformis: 104102627
Entry
104102627         CDS       T05025                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104102627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nto03041]
    104102627
Spliceosome [BR:nto03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104102627
 Complex B
    104102627
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 104102627
NCBI-ProteinID: XP_009608682
LinkDB
Position
2:75192566..75205435
AA seq 540 aa
MPRYESKNDDRRRSSPYSYKDRKPHHHESQSNGSRHDRLRDKYSRDQDRHRGEYKDKSSR
GYRRNDDNDDYSHSRNHKFDRRQHREGREKGETRRSRSRSKDRSYGKARSRSNSPLPPKS
KRTSGFDMAPSVATAFSSGEEQILGSSNAPQSIPGMLKNVYPTDTIQINQLGSFPFLPVQ
AMSQQATRHARRVYVGGLPPLANEQTISAFFSHVMSAVGGNSAGPGDAVVNVYINHEKKF
AFVEMRTVEEASNAMALDGVVFEGVSVRVRRPTDYNPSLAAALGPGHPSPHLNLTAAGLM
PGATGDAEEPDRIFVGGLPYLFTEVQIKELLESFGPLRRFEVVKDRETGNSKGYGFCTYQ
DPLVTDIACAALNGLKMGDKTLTVRRANSSSGQVKSEQECILAQARQHIAMQKMAFEAGG
MTIPGTEIGTVMTAEIPTKVLCLTEVITPQELFDDVEYGEILEDMKEEGRKFGDLIDVVI
PRPEPDHQIIEGHGKVFLEYSDITGCSNAKAALGGRKFGGNTVIAIYYPEDKYYDKDYAA
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgcctcgttatgagagcaaaaatgatgatcgcagaagatcgtctccgtattcttacaaa
gatcgaaagccgcatcatcacgagagccaatctaatgggtctcggcacgatagattgagg
gataaatattccagagatcaagaccgtcatcgtggggaatacaaggataaaagcagtagg
ggctacagaagaaatgatgacaatgatgattacagccattccaggaatcataaatttgac
aggcgccaacatcgtgaaggtagagaaaagggtgagacacgtagatcccgttcaaggtca
aaggatcgttcttatgggaaagctagatcaagatcaaattctcctttacctccaaagagc
aagcggacaagtggctttgatatggctccatcagtagcaacagctttttctagtggggaa
gagcaaattctgggttcttccaatgcccctcaatcaattcctggaatgttaaaaaacgta
tatccaactgatacaattcagattaatcagttgggttctttccctttcttgccagttcaa
gccatgagtcagcaagctacaagacatgcacgacgcgtctatgttggtggcctcccacca
ctggctaatgaacagacaatctcggcattttttagtcatgttatgagtgcagttggtgga
aattctgctggtccaggcgatgcagttgtcaatgtgtacattaatcatgaaaagaagttt
gcatttgtggagatgagaacagttgaagaagccagtaatgcaatggcattagatggagtt
gtttttgagggtgtttctgtcagggttcgaaggcctactgattacaatccttctttggct
gctgcacttggtcctggtcatccaagccctcaccttaacttaactgctgctgggcttatg
cctggagcaactggggacgcggaggaacctgatcgtatttttgttggtggattgccatac
ctctttactgaagtgcagataaaagaactactggagtcttttggacctttgcgcagattt
gaggtggtgaaggatagagagacaggaaactctaaaggttatggtttctgcacatatcag
gatccattagttacagacattgcttgtgctgcgttaaacggcttaaagatgggtgacaag
acattgacggttcgacgtgctaactctagcagcgggcaggtgaaatctgaacaggagtgt
atattagctcaggcaaggcaacatatagctatgcagaaaatggcttttgaagctggtggt
atgactattcctggtactgagatagggactgttatgactgctgaaattccaaccaaggtg
ttatgcttaactgaggtaattacccctcaagaattgtttgatgacgtagagtatggagaa
attttggaagacatgaaagaagaaggccgaaaatttggtgacttgattgatgttgttata
cctcggccagaacctgatcatcaaattatcgaaggtcatgggaaggtatttctcgagtac
tcggacattactggttgtagcaatgcaaaggctgcgcttggtggcaggaaatttggagga
aatacagttattgctatttattatcctgaagacaaatactatgacaaggattatgccgct
tag

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