Nicotiana tomentosiformis: 104103012
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Entry
104103012 CDS
T05025
Name
(RefSeq) RING-H2 finger protein ATL3-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104103012
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104103012
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104103012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-ANAPC11
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
Zn_ribbon_IFT122_C
zf-C3H2C3
zf-HC5HC2H
zf-RING-like
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
104103012
NCBI-ProteinID:
XP_009609173
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All DBs
Position
2:123145453..123146521
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AA seq
246 aa
AA seq
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MTIAISMILLFVGIGILILIHVCIVGRAYRRGIGTTNIVERGSLASNSMSHEDIEKLPSY
AFQSKDKGTSQVECAVCLDNLKVGDKCRLLPQCNHSFHAECVDLWLLKISICPICRATAG
GSISGGESSRFSESGRQELNAETAELAEMILVPESGNSVNYLSFEMRANHTTQNSEQLSG
VGSTDGQTSEANVSFSETRNDWRVSQEESVRLSENSTEELRATQPIESIHLVHEEILHQE
TLKQLD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgcgatatcaatgatactgctctttgtggggattggaattctgatcctaatt
catgtctgtattgtcgggagagcttacagaagaggaattggaactactaacatagtggaa
agaggcagcttagcgagcaacagcatgtcccatgaggatatagaaaagcttccttcctat
gcctttcagtccaaagataaaggaaccagtcaagttgaatgtgcagtttgtttggataat
ctcaaggtgggtgataagtgcaggttattgcctcagtgcaatcacagttttcatgctgag
tgcgtagatttgtggctcttgaaaatctccatttgcccaatttgcagagctactgctggt
ggatccatatctggaggagaaagtagccgatttagcgaaagtggcaggcaggaattaaac
gcggaaactgctgaattagcagagatgatattggtaccagagagtggcaattccgttaac
tatttaagctttgagatgagagcgaatcatacaacccaaaacagtgagcaattgagcgga
gttggttcaactgatggccaaactagtgaagcgaatgtgagctttagtgaaacaagaaat
gattggagagtgagccaagaagaaagtgtccgtttaagtgagaattctactgaggagttg
agagcaacccaacctatagaaagtatccatttggtccatgaagaaatactacatcaagag
accctcaaacagcttgattaa
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