Nicotiana tomentosiformis: 104103022
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Entry
104103022 CDS
T05025
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nto01002
]
104103022
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104103022
Enzymes [BR:
nto01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104103022
Peptidases and inhibitors [BR:
nto01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104103022
Ubiquitin system [BR:
nto04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104103022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
104103022
NCBI-ProteinID:
XP_009609184
LinkDB
All DBs
Position
4:105942894..105953100
Genome browser
AA seq
1175 aa
AA seq
DB search
MLVGGDLGFLSSLVVAAFVAVFGPVLGFVVRRKWRRSVARREEIKRLLVLASEEAARAEL
LAAEEYGYGYGGYSYDILKEDDVFVEPPASSAPPPPSSTTTSYSGSRQLQYQCAVCSSPT
STRCSQCKAVRYCSGKCQILHWRQGHKDECRPVSNTDHHNDVDATSHLNAYKQESNGSHL
KSIEVEGRHSSESGDASPAEAAVLRSKHSATYDAKDVSNEQSLTEAKCPNLNSSYVLHSS
QCEHLDLTASSESSVDLSASDSNDSDASDSHKSAIIAKVKSQANHSKVDGCKPPYREQPK
LVSAADVVSTSGKYNPTKLIIHGDTQSKYWTSTSSSNDGSSESSSTEPSTPSSGFWEGAV
PYTRSKIQSLDSIAYSPSRNACNTKISDFQSTSSQPPEMARPLVSEVGEHGSNSKKNLKN
PNPITVERRKPVERAESRFEVKDETESRRSSASRSVTSNQLDVHDSSDKYTSTPEEGRYS
SSGASGNLKNHDGLKVSSLPLSSPKKSYCGVEGSASVLQLPKDRQKESSPAKISGSHISS
SNGRHEVQNVKSPRIDSTQVSSACSAESNVPLPNARSGLKSSVLKVVDQFRGSKLTRHNS
LGDECEVVGRYGNKGLFPYESFVKLHNWKNELRPFGLVNCGNSCYANAVLQCLAFTPPLT
SYFLQGLHSKTCEKKGWCFTCEFESLVLKAKDGTSPLSPISIISHLESIGSNLGNGREED
AHEFLRYVIDTMQSICLREAGVSASGSFEEETTLVGLMFGGYLRSKIECMRCGGKSERQE
RMMDLTVEIDGDIGTLEEALKQFTHTETLDGENKYRCGRCKSYEKAKKKLKVLEAPNVLT
IALKRFQSGKFGKLNKTIKFPEILNLAPYMSGTRDKSPVYQLYGVVVHLDVMNAAFSGHY
VCYVRNFQNRWFKVNDSSVKSVELERVLSEGAYMLLYSRCSPRAPRIMRSLAIPLDPRRS
KQLACKSRSHTRSPWDSSHGDSTDQTCSECSYTSHTSVRPSRSIFEDDSSSEQSSSLFSE
GASCSTESTNRDSTSTDELFDQIFGESGGCWNNPWRNSSDSDTSSSSSSPSPLYSKHSPL
ADLDRNASAHEETCSSCSDGAETAGDGHGFWTGLPDRNGYAGVRESNSRTPLCPNSSKHC
RNLFSSHSSSKTDSSRLGRVNPSDNSKSPVTRRDR
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgggaggggatctagggtttctctcgagcttggtggtggcggcttttgtggcg
gtttttggaccggtgttaggttttgtggttcgccgaaaatggcggcgttcggtggccagg
agggaggagatcaagaggcttttggttttggcttcagaggaggcagctagggctgagcta
ctagccgctgaagaatacggctacggttatggaggatatagttatgatattctgaaggag
gatgacgtattcgttgaaccgccagcatcatcagcaccaccaccaccatcatcaactaca
acatcatattctggttcacggcaattgcagtaccaatgcgcagtttgctcttctccgacc
tctactcggtgctctcaatgtaaagcagttcgctactgctctggcaaatgtcaaatcctt
cattggagacaaggtcacaaggatgaatgccgtccagttagcaacacagatcaccacaat
gatgttgatgcgacatctcatctgaatgcatataagcaggaatcaaatggaagtcatctt
aagagcattgaggttgaagggagacattcttcagaatcaggcgatgcttccccagcagaa
gctgcagttttgagatccaaacactctgcaacatatgatgcgaaggatgtctcaaatgaa
cagagtctgacagaagcaaaatgtcccaatttgaactccagttacgtgcttcactcatct
caatgtgaacatttggacctcactgcctcaagtgaatcgtctgttgatctttctgcttct
gattcaaatgactctgatgcttctgacagtcataagtctgctattattgctaaagttaag
agtcaggctaatcattccaaggtagacggatgtaagccaccctacagagagcaacccaaa
ctggtatctgctgcagatgttgtttcaacgtcaggcaaatataatcccacaaagcttatc
attcatggggacacgcagtctaaatattggacatcgacaagttcaagtaatgatggatcc
agtgaatcttcatcaacagagccttctacaccctcatctggtttttgggaaggagcagtt
ccttatactagatctaagattcagtcacttgacagtattgcatattctccttccagaaat
gcttgcaacaccaagatttcagattttcagtcaacttcatctcagccccctgaaatggct
agacctcttgtttctgaggtgggtgaacatggatccaactcaaaaaagaatctgaaaaat
ccaaacccaattacagtggaacggcggaaaccagtcgaacgagctgaatcaagatttgaa
gttaaagatgagacagaaagcaggaggtcatcagcttcacgatctgtaacttcgaatcaa
cttgatgtgcatgactccagtgataaatatacatcgacccccgaggaaggtagatactcc
tcatctggtgcttctggtaatttaaagaatcatgatgggttaaaagttagtagcttgcca
ttgtcaagccccaaaaaatcatattgtggcgttgaaggctcggccagtgttttacaattg
ccaaaagatagacaaaaagaatcttctcctgccaaaatttctggtagtcatatctcttct
agcaatgggaggcatgaagttcaaaatgtgaagtctcctaggattgatagcactcaagtg
tctagtgcctgttctgcagagtcaaatgttcctttaccaaatgcaaggagtggcttgaag
tcatcggtgttgaaagttgttgaccagttcaggggttcaaagctgacacggcataattct
ttgggggatgagtgtgaggtcgttggaagatatggtaacaagggtctttttccatatgaa
agttttgtgaagcttcataattggaagaatgaattgcggccatttggcctcgttaactgt
ggtaacagctgctatgctaatgctgtccttcaatgcctggcgtttactccaccgcttact
tcctattttcttcaagggctccactccaaaacatgtgaaaagaaagggtggtgcttcacg
tgtgagttcgagagtctagttctaaaagcaaaggacggaacctctcctctctctcctatt
agcataatttcccatctcgagagcatcggaagcaatcttggtaatggtagagaagaagat
gcacatgaattccttaggtatgttatcgacacaatgcaatccatttgcttgagggaagct
ggggttagtgcatctggctcttttgaagaagaaacaactctcgtggggcttatgtttggg
ggataccttcgttcaaagatcgagtgcatgaggtgcgggggcaaatctgaaaggcaagag
agaatgatggatcttactgttgaaatagacggagatataggtaccttggaggaagcttta
aaacaatttactcataccgagactctagacggtgaaaacaagtaccgatgtggcagatgt
aaatcatatgagaaggccaagaaaaagttgaaagtgctggaggctcctaatgtcctcact
attgcattaaagagatttcagtcaggtaaatttgggaagctaaacaagacaattaaattt
ccagagattctgaacctggcaccatatatgagtgggacacgtgataagtcgccagtttac
cagctttatggagtcgtggttcacctggacgtaatgaatgctgcattttctggtcactat
gtgtgttatgtgaggaactttcagaataggtggttcaaagttaatgatagttcggtaaaa
tccgtcgaacttgaaagagtcttgtcggagggagcatacatgcttctctattcaaggtgc
tcgccacgggctccgagaataatgaggagtttggcaattcctcttgatccaagaagatct
aagcaattggcttgtaaatcaagatcccatacaagaagtccatgggactcttctcatggc
gattcaactgatcaaacttgcagcgaatgctcttatactagtcatacaagtgtcaggccg
agtaggtcaatatttgaggacgactcatcaagcgaacagtcatcctctctcttctctgag
ggtgcttcttgcagcacagagagcactaacagggattctactagcactgatgaattattt
gatcaaatatttggtgagtctggaggttgttggaataacccgtggaggaattcatcagat
tctgacacatcgtcatcctcatcttctccttcccctctatactcgaaacattcacctctt
gctgatttggaccgtaatgcttctgcacatgaagagacctgtagcagttgtagcgacggt
gcagaaacagctggggatggtcacggtttttggacagggttacctgatcgaaacggttat
gctggggttcgagaaagcaattcaaggacacctctctgtcccaactcaagtaagcattgt
agaaatttatttagtagtcatagtagtagtaagaccgactccagtagattaggtcgggtt
aacccttctgacaactcgaaatctcctgtaactcgtagagatcgatga
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integrated database retrieval system
