Nicotiana tomentosiformis: 104103176
Help
Entry
104103176 CDS
T05025
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104103176
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
104103176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
Motif
Other DBs
NCBI-GeneID:
104103176
NCBI-ProteinID:
XP_009609357
LinkDB
All DBs
Position
1:59069176..59074506
Genome browser
AA seq
641 aa
AA seq
DB search
MHEPNLVAASSVPHSATTVPAAANNNSPLPRRVVFRLLCHASRVGGVIGKSGSIIRQLQQ
DTSAKIHVDVSTPNSDHHRLIVVVASASLNKKIRLNLLGPTGGDEQQWNDEIEVSAAQEA
LVRVFERVIDVTAENNGVVLGAESVVSCRLLVKGNQVGALMGKGGKVIDAIRRENGCRIK
VLTSDKLPSCASPNDEIVEIEGDILAVKKALVAVSRRLQDCFSVERNRTVENAPLELDSE
QTLPPRQVDLPAQRSSMSQPITTSSFSGASGCHPVSLDAEKFSNIDAKIPLQEVAFRILC
PNEKVGAIIGKGGAIVRTLQNDSGASIAVGPNVVECNERVIAITALENLELRKSPAQTAA
VLVFDRILDAGSGMNLGTRSLITFRLVVPSNQVGCLLGKGGAIISEIRKETGSSIRIFRG
DQVPKCVSDNDEVVQIAGEFVNVQDALRNVTGRLRDNLLAAKVSNGAVSRNSSPLASESS
FSGQMKEPPFGFHRSSGVSHGINQHPDLTRSMDNLVLSNNIDHPPSPGQWSSQTRPGGNQ
RGAFDVSKGSNSVKGGIELGCGSRSAIVTNTTVEILVPESVISSVYGENGSNLARLRQIS
GAKVMVHEGRSGTTDRTIVISGTPDETQAAQSLLQAFILTG
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaacccaacctcgtcgccgcctcctccgtcccccactccgccaccaccgtaccc
gccgccgccaacaacaactcaccgctaccgaggcgtgtcgtgttccgtctcctctgccat
gcttcccgcgtcggaggagtcatcggaaaatcaggttccatcatccgacaactccaacaa
gatacctccgcaaagattcacgttgatgtctccactcccaactccgaccaccaccgcctc
atcgtcgtcgtagcctccgcttccctaaacaagaagattaggctcaatctcttgggcccc
accgggggggatgagcagcagtggaatgatgagattgaggtttcggctgcacaagaggca
ctcgttagggttttcgaaagagtgatagatgtaacagctgaaaataatggcgttgttttg
ggtgcggagagtgtggtgtcgtgtaggttattagtgaaggggaatcaggtgggtgctttg
atgggtaaaggtggaaaagtaattgatgcaattagaagagagaatggatgtaggattaag
gttttaacttcagataagttgccatcttgtgcttcgcccaatgatgaaatagttgagata
gaaggggacattctggctgttaagaaagcacttgttgctgtcagtcgccgacttcaagat
tgtttctctgttgaaagaaatagaacggttgagaatgcgccacttgagttagattcggaa
cagactttgcctcctcggcaagttgatctacctgcacaaaggagttcaatgtcacagccc
ataaccacaagctctttctcaggtgcctctggatgccatcctgtgtctctagatgctgag
aagttttccaacattgatgcaaaaataccattacaagaggttgctttcaggattctctgc
ccaaatgaaaaggttggtgcaataataggcaagggtggggcaattgtaaggactcttcag
aatgacagcggtgcaagcatcgctgttgggccaaatgtcgttgagtgcaacgagcgagtg
atagctattaccgcattagagaacctagaattacggaaatctccagcacaaaccgctgcg
gttcttgtttttgatcggattctggacgctggctctgggatgaatttgggtacaagatca
ctaattacatttcgacttgtggtgccatccaaccaagttggttgtttattggggaaggga
ggcgcaataatttcagagataaggaaggagacaggttccagcatacgaatatttagaggt
gaccaagtccctaagtgtgtctcagacaatgatgaagttgtgcagattgcaggtgagttt
gtaaatgtacaagatgctttacgaaatgtcactggtcggttgcgtgataacctcttggca
gcgaaggtgtcaaatggtgctgtaagcagaaacagctctcctctggcgtctgaaagtagt
ttctctggccaaatgaaggaacctccttttggatttcatcggtctagtggtgtctcacat
ggtatcaatcagcatcctgatttaacacggtctatggataaccttgtactttccaacaac
atagatcatcccccatcaccaggacagtggtcatcacagacacgacctggaggaaaccaa
agaggtgcttttgacgtcagcaaaggatctaattcagtaaaaggcggcatagaacttgga
tgtggaagcagatctgccattgtgaccaatactactgtggagatcttggttcctgaaagt
gttatcagctctgtgtatggggagaacgggagcaacttggctcgtctaagacagatttca
ggtgcaaaggtcatggtacacgagggccgctctggaacaactgacaggactatcgtaatc
tctgggacaccagatgaaacacaggctgctcagagcctccttcaggcattcatactaact
ggatag
DBGET
integrated database retrieval system
