Nicotiana tomentosiformis: 104103883
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Entry
104103883 CDS
T05025
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104103883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104103883
03036 Chromosome and associated proteins [BR:
nto03036
]
104103883
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104103883
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104103883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
104103883
NCBI-ProteinID:
XP_009610119
LinkDB
All DBs
Position
11:75257109..75267575
Genome browser
AA seq
1143 aa
AA seq
DB search
MSLFSAPSSSPSFSSSNLFGNRAFGATSSASSSASSVFAQPIGSSVSFGGTKASSATNNA
TAFQTQDKSLGSSSTLPTFGKKYGGNGVANESLVWSRDASVSAPAFGVASNSHFGMSSTP
TFGSCSFDMPAVSTSGISGFGGLLIPRPFNESTVEHFGMSSTPRFGSYSFGQPAVSVSAL
NPLFSSSNMFGSTPEIGQTQPLFGNRAFGETSSASSVFAQPIGSSVSFNGTTTFNAANDA
TAFQTQDKSLGSSTLSTFGKKYEGNGVANKPLLWSRDASVSAPALGVASNSHFGMSSTPA
FGSYSSVQPAVSTSGISGFGGLVIPRPFDRPAAFVSGKESTAPLLKSFSFGKAACGFNQN
GSRIASYIATPEKDSTKPGETIQSICGMHTYKDKSQEELRFEDYQLGDKGISGFGVIDNS
RTFQSPVFNQSTVDHPNPFAVKREPSSGHCPNPFAVKREPSYCHCPNPFAVEREPFDFHP
PNPCAVKREPSYCHPPNPFAVKREPSSGHCPNPFAVKREPSYCHCPNPFAVEREPFDFHP
PNPCAVKREPSYCHPPNPFAVEREPFDFHPPNPFAVKREPFCSHCPNPFAMKREPSYCHC
PNPFSVEREPFDFHPPNPFAVKREPFCSHCPNPFAMKREPSYCHCPNPFAVERERFDFHP
PNPFAVKREPSYCHCSNPFVVEREPFDFHPPNPFAVKREPFCSHCPNPFAVKREPSYCHC
PNPFATKRAGFDSLSKEKSTTTPPGTGTRVASYAATREVEGQYSIKFLSISAMPLYSNKS
HEELRLEDYESANKGAASILQSKPFESSSGSTASNVFFSPWIHSSPFAAPLKPDSSSPIT
SALSPAPILTTGAAPQSTLCSNCLNKSQSSYQLQPTSPRLCDSSIGLENLTTSSQLYPLG
PSQNTPLFVGPLHPEMTPNVGETLPTAISSHPATENVGMHDGVKVNDSCGKPNLAPEEMH
YDNSGKLKPCFIVSVESAAEEATDSKHDDKDVDAIMPKLQRSDYYTVPPIQELISKEKEE
PGFCTHVTDFVVGRHGYGSIKFLGETDVRKLDLDSAVHFNCREVIIYMDESKKPPVGQGL
NKPAEITLLNVRCINKSTGKEYTDGPIVNKYRDMLIKKAGVHGAEFVSYDPVKGEWAFKV
SHF
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgttttccgccccatcttctagtccgtcatttagtagtagcaatctgtttgga
aatagagcatttggagcaacctcatcagcttcatcatcggcatcatcagtatttgctcaa
cctattggaagttcagtgtcttttggcggaacaaaagcctctagtgcaacaaacaatgct
acagcttttcaaacacaagacaaatctctgggctcgtcatccactttaccaacatttgga
aagaaatatggaggtaatggtgtggccaatgaatctctggtgtggtccagggatgccagt
gtttcagctcctgcatttggtgttgcaagcaactcacactttggcatgtcaagcactccc
acatttggttcctgctcctttgacatgccagcagtatccacgtcaggcatatctggattt
ggtggcctcctcataccaaggcccttcaacgaatcaacagtcgagcactttggtatgtca
agcactccaagatttggttcctactcctttggccagccagcagtatccgtgtcagcttta
aatccgttatttagcagcagcaatatgtttggttctacccccgaaattggacagactcaa
ccactgtttggaaatagagcatttggagaaacctcatcagcatcatccgtatttgctcaa
cctattggaagttcagtgtctttcaatggaaccacaacatttaatgcagcaaacgatgct
acagcttttcaaacgcaagacaaatctctgggctcgtccactttatcaacatttggaaag
aaatatgaaggtaatggtgtggccaataaacctctgttgtggtccagggatgccagtgtt
tcagctcctgcattgggtgttgcaagcaactcacactttggcatgtcaagcactcccgca
tttggttcctactcctccgtccagccagcagtatccacgtcaggcatatctggatttggt
ggcctcgtcataccaaggccttttgaccggccagcagcatttgtgtcaggaaaagaaagt
acagcaccattgctcaagagctttagttttggaaaggcagcatgtggtttcaatcagaat
ggaagtagaatagcatcatacatcgcaactccagagaaagatagcacaaaaccaggtgaa
acaattcagtccatttgtggcatgcacacttataaagataaaagccaggaggagttgagg
tttgaggactatcagttaggtgataaaggcatatctggatttggtgtcattgacaactca
aggacttttcaatcaccagtatttaaccaatcaactgttgatcatccaaatccatttgcc
gtgaaaagagaaccttcttctggtcattgtccaaatccatttgccgtgaaaagagaacct
tcttattgtcattgtccaaatccatttgccgtggaaagagaaccttttgattttcatcct
ccaaatccatgtgctgtgaaaagagaaccttcgtattgtcatcctccaaatccatttgcc
gtgaaaagagaaccttcttctggtcattgtccaaatccatttgccgtgaaaagagaacct
tcttattgtcattgtccaaatccatttgccgtggaaagagaaccttttgattttcatcct
ccaaatccatgtgctgtgaaaagagaaccttcttattgtcatcctccaaatccatttgcc
gtggaaagagaaccttttgattttcatcctccaaatccatttgccgtgaaaagagaacct
ttttgttctcattgtccaaatccatttgccatgaaaagagaaccttcttattgtcactgt
ccaaatccattttccgtggaaagagaaccttttgattttcatcctccaaatccatttgcc
gtgaaaagagaacctttttgttctcattgtccaaatccatttgccatgaaaagagaacct
tcttattgtcactgtccaaatccatttgccgtggaaagagaacgttttgattttcatcct
ccaaatccgtttgctgtgaaaagagaaccttcttattgtcattgttcaaatccatttgtc
gtggaaagagaaccttttgattttcatcctccaaatccatttgccgtgaaaagagaacct
ttttgttctcactgtccaaatccatttgccgtgaaaagagaaccttcttattgtcactgt
ccgaatccatttgccacgaaaagagcagggtttgattctctatcaaaagagaagtctacc
acaaccccacctggcactggaactagagtggcatcttatgctgcaactagagaagtggaa
ggacaatattcaataaagtttttgtcaatctctgctatgccattgtattctaataaaagc
cacgaggagttgaggttagaggactatgaatctgcaaacaaaggggctgcatcaatttta
caaagtaaaccatttgagtcttcatcaggatctactgcctcaaatgtatttttttctcca
tggatccattcaagtccatttgctgcacctttgaaaccagattctagttctccgattacc
tccgccctttctcccgctcctattttaactaccggagcagctccacaatccacattatgc
tcaaactgcctaaacaagtctcaatcatcctaccagctgcagcctacttccccaagactt
tgtgattcatctattgggttggaaaacttgactacatcctctcagctctatccacttggt
ccaagtcaaaatactcctctgttcgttggtcctctgcacccagaaatgactccaaatgtt
ggagaaacacttcctacagccatctcttctcatccagcaacagaaaatgtagggatgcat
gatggagtcaaagttaatgacagttgtggcaagcccaacttagcgcctgaagagatgcat
tatgataattctggaaagctgaaaccttgtttcatagtttcagttgaaagtgctgctgaa
gaagcaacagatagcaagcatgatgataaggatgttgatgccataatgcccaagctccaa
cgttctgattactacacagttcctcctattcaggaattaatatcaaaggagaaggaagaa
cctggtttctgtacccacgtgacggactttgtggtaggaagacatggctatggaagcatc
aagttcttgggagaaacagatgtccggaagcttgatcttgattctgccgtccattttaac
tgtcgtgaagtgatcatctatatggacgagagcaagaaacctccagttggacaaggcctc
aacaagccagctgagataactctccttaatgtcagatgcatcaacaaatcgaccgggaag
gagtacacagatggaccaatagttaacaagtacagagatatgcttattaagaaagcagga
gtgcatggtgcagaatttgtttcttatgatccagtaaaaggggagtgggcatttaaagtg
tcacacttttag
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