Nicotiana tomentosiformis: 104103914
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Entry
104103914 CDS
T05025
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104103914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nto03036
]
104103914
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
104103914
INO80 complex (yeast)
104103914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
104103914
NCBI-ProteinID:
XP_070055576
LinkDB
All DBs
Position
4:complement(1708265..1728229)
Genome browser
AA seq
1542 aa
AA seq
DB search
MDPKRRYSYSNLFNLESLINFQLPQLDDDFDHHGNSSQDESRGSPGGAHGNRSNGTMSGR
ELKKKRQTSYSSDEDGDGDRGYSTHISEERYRAMLGEHIQKYKRRLGNSSASPAATRNGM
PAMRSGGGSRDQKSTNDHRGGAHRLDSASDCFNNSTQKLGNHIQSDFPGPYAGDRSIYEP
AFLDLGEDITYRIPPPYEKLATLLNLPTMSDIQVNEIYLKGTLDLETLAAMMASDKRLGP
KRQAGMSDPKPQFESLQARLRAQPANSAGQKFSLQVSEAALEASSIPEGAAGGIRRSILS
EGGVLQVYYVKVLEKGDTYEIIERSLPKKPKLKKDPSVIEKEEMDKIGKYWINLVRKEIP
KHHKTFINFHRKQLTDAKRFSETCQREVKMKVSRSLKVMRGAAIRTRKLARDMLVFWKRV
DKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKSTLSSEAV
TLGDEMTNDQEMLLSSGEARPGEEEDPEEAELRKEALKAAQDAVSKQKMMTSAFDSECLK
LRQAAEIEPSQQDAAAANIDLLHPSTMPVASTVQTPEIFKGTLKEYQLKGLQWLVNCYEQ
GLNGILADEMGLGKTIQAMAFLAHLAEDKNIWGPFLVVAPASVLNNWADEIGRFCPDLKT
LPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQ
AIKSANSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFDSHEQFNEWFSK
GIENHAEHGGTLNEHQLSRLHAILKPFMLRRVKKDVVSELTGKTEITVHCKLSSRQQAFY
RAIRDKISLAELFDSSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGTSYFYFGEVP
NSLLPPPFGELEDVFYSGGRSAVTYQIPKLVYREALRSSMLHSTLAQGVRKELFDKYFNI
YSPENIHRSILQEVHKSDVGYIRSGTFGFTRLIDMSPMEVSFSATGSFLEKLLFSIVRSK
RQFSDEILDLLMESKDDDLYFRHLGRDKVRAVTRMLLLPSKTGTDLLRTRLATGPGDAPF
EALVMEHQDRLLSNVNLLHSIYSFIPRTRAPPINAHCSDRNFAYKMLEELHHPWIKRLLV
GFARTSEYNGPRKPGVTHHLIQEIDSELPVSQPALQLTYKIFGSCPPVQPFDPAKMLTDS
GKLQTLDILLKRLRAGNHRVLLFAQMTKMLDIIEDYMHYRKYKYLRLDGSSTIMDRRDMV
KDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVT
VYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLLIDDKQLEQKLKE
IPLQQAKERQKRKGGTKGIRIGADGDASLEDLTNGESVGNVDDTLDPGKAKSSSKKRKGS
TDKQTPKSRPQKNPKNLESLSPNSLMEDDIDVSPQNIDMQQRPKRLKRPTKSVNENLEPA
FTASPPMNREGNHNYSLSDISTSGGRGGAEEEALRHNNLLAG
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggacccaaagaggcgatattcctactccaatctcttcaatcttgagtctttgattaac
ttccagctgccccaactggatgatgattttgatcatcatgggaatagtagtcaggatgag
agcagaggtagcccaggtggagcacacgggaaccggagtaatggtacaatgtctggtagg
gagttgaagaaaaagaggcagacttcatatagtagtgacgaagacggggatggggacaga
ggttatagtacccatatttcagaggaaaggtatagagcaatgctgggagaacacattcaa
aagtataagaggaggcttggtaattcctcagcaagccctgcagctactcgtaatgggatg
cctgcgatgagaagtggtggaggatcaagagaccagaaatcaacaaatgatcatagagga
ggagcacacagacttgactctgcatcagattgttttaacaatagcactcagaagttaggg
aaccatattcagtctgattttccaggaccatatgctggtgatagatctatttatgaacct
gctttcttggatctcggggaggacatcacatacaggatccctccaccctatgaaaagctg
gcaacattattgaatttgccaaccatgtcagatattcaagttaatgaaatttacctcaag
ggtacacttgatttggagactttggctgcaatgatggcttctgataagagacttgggccc
aaacgtcaagcaggaatgagtgatcccaagccccaatttgaatctcttcaggcacgactg
cgagcccagcctgctaatagtgccggtcagaaattcagtctgcaagtcagcgaagctgca
ttagaggcatcttctatccctgagggggctgcaggaggtatacggcgttctatattgtca
gagggtggtgtcttacaggtttattatgtgaaagtgttagagaaaggagacacctacgag
attattgaacgtagtctacccaaaaagccaaaactgaagaaagatccttctgtgattgag
aaggaagagatggataagattggaaaatattggataaaccttgtcagaaaagaaatccca
aaacatcataagacattcatcaatttccacaggaagcaattgactgatgccaagaggttt
tcagaaacttgtcagagagaggtaaaaatgaaagttagcagatcacttaaggtgatgaga
ggtgctgcaattcgtacaaggaaacttgctagggacatgctcgtgttttggaagagagtt
gacaaggagatggcagaagtaaggaaaagggaggaaaaagaagctgcagaagctttgaag
cgcgaacaggagcttcgtgaagcaaagagacaacaacagaggctcaactttctgctatct
caaactgaactttacagccatttcatgcaaaataaatcaactttatcctctgaggctgtg
actttaggtgatgaaatgacaaatgaccaagaaatgttgttaagttcgggtgaagctaga
cctggagaggaagaggatcctgaagaggctgagctgagaaaagaggctttgaaagctgca
caggatgcagtttcaaagcagaaaatgatgacaagtgcatttgatagtgaatgtctgaag
ctgcggcaagctgctgaaattgaaccctcccagcaagatgccgcagccgctaacatagac
ttattgcatccgtcaaccatgcctgtggcatcaacagtacagacgccagaaatattcaag
ggtactcttaaagagtatcagttgaaaggcctccagtggcttgtaaattgttacgagcag
ggtttaaatggtattcttgctgatgagatgggtcttggcaaaacaatccaggccatggcc
ttcttggctcatttggcagaagacaagaatatatggggtccctttttagttgttgctccg
gcatcagtcttgaacaactgggctgatgaaattggtcgtttctgccctgatctgaaaact
cttccatattggggagggttacaagagcgaatggtacttcggaagaatattaacccaaaa
cgtctatatcggcgggatgctggattccatattctcattaccagttatcaactgctagtc
tctgatgagaaatacttcagacgcgtcaaatggcaatacatggtactggatgaagctcag
gcaatcaaaagcgcaaacagtataagatggaagacattgttgagtttcaattgtcgaaac
cgtttgcttctgactggtactcccgttcaaaataacatggctgagctctgggcgctcctc
cactttattatgcctactttatttgatagccacgaacaattcaacgaatggttttcaaaa
ggaattgagaaccacgcagagcatggtgggacgttgaacgagcaccagctcagccgactg
catgccattttaaaacccttcatgctccgacgggttaaaaaggatgtggtttctgagttg
actgggaaaactgaaatcacagtgcactgtaagttgagttctcgtcagcaggcattttat
cgagcaataagagacaagatatcccttgctgagttgtttgatagcagccgtgggcatctc
aatgagaagaaaattctaaacctgatgaatattgttatccagctaaggaaggtgtgcaac
catccagagctgtttgagagaaatgaaggaacttcttacttctattttggagaggttcca
aactcacttctacctcctcccttcggggaactggaggatgtattctattctggcggtcga
agtgctgttacataccagattccaaagttggtataccgggaagctctcagatcgagcatg
cttcactcaactctggcccaaggtgtaagaaaagaattatttgataagtactttaacata
tattctccggagaatattcaccgctcgatcctgcaagaagtacacaagtcagatgttggc
tatatacggagcggaacatttggttttactcggttgattgatatgtcacctatggaggtt
tcattttcggcaactggttcttttttggaaaaattgttattctcaattgtgagaagcaag
cgacagttttcagatgaaattttggacttgctgatggagtctaaggatgatgatctctat
tttaggcaccttgggcgggacaaagtaagagcggtgacgcgaatgttattgcttccatct
aagacaggaacagatttattaagaacaagacttgccacaggtcctggtgatgcaccattt
gaagctttggtcatggaacatcaggataggcttttatctaatgttaatctcttacattcc
atatactccttcattcctagaacaagagcaccccctataaatgctcattgctcggataga
aattttgcttacaaaatgctcgaggaactacaccatccatggattaagaggttgttggtt
gggtttgcacgcacatcggaatataatggtcctaggaagccaggtgtcacacaccattta
atacaagagatagactctgaattacctgtctcacaacctgctcttcagcttacatacaaa
atatttggatcatgtccacccgtgcaaccatttgaccctgcaaagatgctaacagactca
gggaagcttcaaacacttgacatattattaaagcgcttgcgggcagggaatcaccgtgtt
cttctctttgcacaaatgacaaaaatgttggatattatagaggactacatgcactacagg
aaatataagtacttgaggcttgatggatcttccactataatggatagacgagacatggtc
aaagatttccagcatcggagcgacatttttgtgttcttgctgagtacaagagcagggggc
cttggtatcaacttgactgctgctgacactgtcatcttctatgagagtgactggaatcca
actttagatttacaggcgatggatagagctcataggctgggtcaaactaaggatgttact
gtttatcgcttaatctgtaaagagacggttgaagagaaaattctccagagagccagtcag
aagaacaccgtgcaacagcttgtcatgacaggaggacatgttcagggtgaccttttggct
ccagaagatgtcgtctctttgctgattgatgataaacaattggagcagaaactgaaggaa
attcctcttcagcaggctaaagaaagacaaaagaggaaaggtggcaccaaaggcatacga
attggtgcggatggtgatgcatcattagaagatcttacaaacggtgagtctgttgggaat
gtggatgacactcttgatccggggaaagcaaaatcaagtagtaaaaagaggaaaggttcc
accgacaagcaaaccccaaaatcgaggcctcaaaagaatccaaaaaatcttgaatcatta
tcaccaaactcactgatggaagatgatatagatgtctccccacaaaacattgacatgcaa
caacggccaaaaaggctgaagaggccaactaagagcgtcaacgagaaccttgaaccagca
tttactgccagccctcctatgaaccgagaggggaaccataactattctttgtcggatatc
agcaccagtggtgggagaggaggagctgaggaagaagcattaagacataataatctgtta
gctggctga
DBGET
integrated database retrieval system
